Os06g0294200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0294200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 343.43 | 0.871 | 4.39 | -0.853 | 1.41 | -0.0516 | -0.265 | -6.64 | 0.699 | 9.76 | 1002 | 7265 | -- | -- |
| 374.05 | 0.901 | 4.35 | -0.563 | 1.53 | -0.722 | -0.561 | -- | 0.545 | 9.72 | 999.2 | 20466 | -- | -- |
| 343.67 | 0.863 | 4.39 | -0.862 | 1.41 | -0.0585 | -- | -6.67 | 0.697 | 9.73 | 1002 | 7196 | -- | -- |
| 373.01 | 0.9 | 4.36 | -0.599 | 1.41 | -0.769 | -- | -- | 0.56 | 9.79 | 999.3 | 20249 | -- | -- |
| 459.93 | 0.999 | 4.43 | -0.925 | -- | -0.095 | -- | -7.22 | 0.699 | -- | 1002 | 6269 | -- | -- |
| 397.84 | 0.935 | 4.33 | -0.721 | 1.41 | -- | -0.285 | -- | 0.724 | 9.77 | -- | -- | -- | -- |
| 398.15 | 0.934 | 4.33 | -0.732 | 1.41 | -- | -- | -- | 0.723 | 9.75 | -- | -- | -- | -- |
| 492.52 | 1.03 | 4.4 | -0.615 | -- | -0.788 | -- | -- | 0.556 | -- | 999.2 | 19497 | -- | -- |
| 381.61 | 0.91 | 4.35 | -- | 1.43 | -0.836 | -- | -- | 0.601 | 9.83 | 999.2 | 20460 | -- | -- |
| 516.68 | 1.06 | 4.36 | -0.745 | -- | -- | -- | -- | 0.725 | -- | -- | -- | -- | -- |
| 412.27 | 0.95 | 4.31 | -- | 1.41 | -- | -- | -- | 0.805 | 9.79 | -- | -- | -- | -- |
| 493.75 | 1.03 | 4.39 | -- | -- | -1.06 | -- | -- | 0.685 | -- | 999 | 13355 | -- | -- |
| 531.33 | 1.08 | 4.35 | -- | -- | -- | -- | -- | 0.808 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 330.26 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 10 | 332.51 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 19 | 333.41 | humidity | 80 | 43200 | > th | dose independent | sin | 14 | NA |
| 34 | 334.62 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 37 | 334.75 | humidity | 80 | 43200 | < th | dose independent | sin | 14 | NA |
| 42 | 334.83 | wind | 7 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 55 | 335.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 61 | 335.62 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 62 | 335.64 | wind | 7 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 77 | 336.01 | wind | 5 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 99 | 336.84 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 104 | 337.07 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 124 | 337.96 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 140 | 337.98 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 155 | 338.01 | temperature | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 173 | 338.21 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 174 | 338.22 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 177 | 338.23 | temperature | 30 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 182 | 338.25 | temperature | 30 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 187 | 338.28 | temperature | 30 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 192 | 338.32 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 240 | 338.55 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 256 | 338.62 | wind | 7 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 262 | 338.69 | wind | 1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 288 | 338.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 308 | 338.95 | wind | 9 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 349 | 339.17 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 372 | 339.46 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 375 | 339.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 381 | 339.53 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 394 | 339.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 413 | 339.78 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 421 | 339.85 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 422 | 339.87 | temperature | 30 | 43200 | > th | dose independent | sin | 8 | NA |
| 428 | 339.89 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 455 | 339.97 | temperature | 30 | 43200 | < th | dose independent | sin | 8 | NA |
| 459 | 339.98 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 477 | 340.00 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 479 | 340.00 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 482 | 340.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 490 | 340.07 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 506 | 340.16 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 563 | 340.36 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 21 | 15 |
| 607 | 340.50 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 21 | 15 |
| 637 | 340.61 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 698 | 340.73 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 7 | NA |
| 709 | 340.75 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 746 | 340.83 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 753 | 340.86 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 754 | 340.86 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 6 | NA |
| 758 | 340.87 | temperature | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 769 | 340.89 | humidity | 90 | 43200 | < th | dose dependent | sin | 8 | NA |
| 773 | 340.90 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 873 | 341.08 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 22 | 1 |