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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0293100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.27 (0.0462) R2 : 0.00699
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.174 (0.0973) R2dN8 : 0.00902 R2N8 : 0.00699
σ : 0.87
deviance : 347.43
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
306.54 0.823 3.26 0.0351 0.328 1.54 0.681 4.85 -0.152 9.43 24.4 279 16 0.63
322.09 0.836 3.25 0.102 0.35 1.97 0.262 -- -0.126 9.51 22.49 310 16.2 0.633
308.01 0.817 3.26 0.0784 0.345 1.55 -- 4.61 -0.156 9.79 24.4 259 16 0.65
322.06 0.836 3.25 0.108 0.337 1.88 -- -- -0.135 10 22.5 286 16.2 0.587
314.22 0.826 3.27 0.0604 -- 1.4 -- 4.55 -0.152 -- 24.09 236 16.1 0.605
342.4 0.867 3.26 0.126 0.271 -- 0.118 -- -0.158 11.2 -- -- -- --
342.46 0.867 3.26 0.131 0.27 -- -- -- -0.158 11.3 -- -- -- --
328.61 0.844 3.26 0.113 -- 1.77 -- -- -0.132 -- 22.5 317 16.3 0.362
322.41 0.836 3.25 -- 0.331 1.89 -- -- -0.142 10.1 22.49 288 16.2 0.61
347.03 0.87 3.26 0.124 -- -- -- -- -0.16 -- -- -- -- --
342.91 0.866 3.26 -- 0.269 -- -- -- -0.173 11.2 -- -- -- --
328.94 0.845 3.26 -- -- 1.77 -- -- -0.145 -- 22.41 262 16.3 0.46
347.43 0.87 3.27 -- -- -- -- -- -0.174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 309.63 temperature 25.0 270 < th dose independent rect. 16 1
2 311.10 temperature 25.0 270 < th dose dependent rect. 16 1
3 312.54 precipitation 0.1 270 > th dose dependent rect. 17 1
4 312.58 precipitation 0.1 270 > th dose independent rect. 17 1
5 314.82 wind 7.0 30 > th dose independent rect. 19 1
8 315.99 temperature 25.0 270 < th dose independent rect. 15 4
11 317.02 temperature 25.0 270 < th dose dependent rect. 15 4
12 317.17 wind 5.0 30 > th dose dependent rect. 19 1
25 318.73 atmosphere 1005.0 270 > th dose dependent rect. 16 1
35 319.41 temperature 25.0 270 < th dose independent rect. 13 7
42 319.92 precipitation 0.1 10 > th dose independent rect. 17 3
62 319.92 precipitation 0.1 10 > th dose dependent rect. 17 3
82 319.98 radiation 1.0 270 < th dose independent rect. 11 6
121 322.18 precipitation 0.1 10 > th dose independent sin 22 NA
125 322.65 precipitation 0.1 10 > th dose dependent sin 21 NA
130 323.05 temperature 30.0 270 < th dose dependent rect. 13 18
139 323.70 wind 1.0 10 < th dose independent rect. 7 2
146 323.81 wind 3.0 10 < th dose dependent rect. 8 1
153 323.95 temperature 20.0 90 < th dose independent rect. 8 11
154 323.96 temperature 20.0 1440 < th dose independent rect. 4 1
155 323.99 temperature 20.0 1440 > th dose independent rect. 4 1
168 324.15 radiation 10.0 270 < th dose dependent rect. 13 17
173 324.25 temperature 20.0 90 < th dose dependent rect. 8 12
177 324.39 humidity 90.0 10 > th dose independent rect. 17 1
187 324.39 humidity 90.0 10 > th dose dependent rect. 17 1
197 324.40 precipitation 0.1 10 > th dose independent rect. 17 1
225 324.40 precipitation 0.1 10 > th dose dependent rect. 17 1
265 324.80 atmosphere 1005.0 270 > th dose independent rect. 16 1
286 325.02 humidity 70.0 1440 > th dose dependent rect. 8 1
304 325.28 humidity 70.0 1440 > th dose dependent rect. 7 3
312 325.36 radiation 10.0 270 < th dose dependent rect. 15 2
319 325.48 humidity 80.0 4320 > th dose independent rect. 9 1
329 325.65 radiation 10.0 270 < th dose independent rect. 13 18
330 325.66 precipitation 0.1 10 < th dose independent sin 22 NA
331 325.66 precipitation 0.1 10 < th dose dependent sin 22 NA
335 325.73 radiation 1.0 90 > th dose independent rect. 9 20
339 325.78 radiation 1.0 90 > th dose independent rect. 9 10
353 325.85 radiation 1.0 90 > th dose independent rect. 8 22
360 325.96 temperature 20.0 1440 > th dose dependent rect. 2 1
365 326.05 humidity 80.0 270 > th dose dependent rect. 16 1
369 326.11 humidity 80.0 270 > th dose independent rect. 16 1
399 326.38 humidity 70.0 1440 > th dose dependent rect. 3 8
403 326.41 atmosphere 1015.0 4320 < th dose independent rect. 12 1
406 326.43 atmosphere 1015.0 4320 > th dose independent rect. 12 1
418 326.47 atmosphere 1015.0 4320 > th dose dependent rect. 12 1
423 326.49 humidity 80.0 4320 < th dose independent rect. 9 1
440 326.55 temperature 25.0 90 < th dose dependent rect. 5 15
441 326.56 wind 1.0 90 < th dose dependent rect. 7 1
442 326.56 humidity 90.0 4320 < th dose dependent rect. 8 2
444 326.58 humidity 60.0 270 > th dose dependent rect. 16 1
461 326.70 radiation 10.0 720 < th dose dependent rect. 11 12
504 326.86 wind 1.0 90 < th dose independent rect. 6 2
511 326.89 radiation 10.0 720 < th dose dependent rect. 11 6
536 327.02 humidity 90.0 4320 < th dose dependent rect. 5 5
557 327.12 humidity 90.0 1440 < th dose independent rect. 4 6
581 327.22 precipitation 0.1 4320 < th dose independent rect. 6 3
583 327.22 precipitation 0.1 4320 < th dose dependent rect. 6 3
586 327.23 radiation 10.0 270 < th dose dependent rect. 13 5
597 327.27 temperature 25.0 270 < th dose dependent rect. 1 19
635 327.35 humidity 80.0 1440 > th dose independent rect. 23 12
642 327.36 humidity 80.0 1440 > th dose independent rect. 5 6
681 327.43 atmosphere 1015.0 4320 > th dose dependent rect. 8 1
698 327.47 wind 5.0 30 > th dose dependent rect. 19 13
703 327.49 wind 3.0 14400 > th dose independent rect. 1 2
725 327.54 temperature 20.0 720 > th dose dependent rect. 12 18
726 327.55 temperature 20.0 1440 > th dose independent rect. 22 8
757 327.61 humidity 80.0 270 > th dose dependent rect. 14 5
788 327.69 humidity 50.0 4320 > th dose independent rect. 12 2
789 327.70 wind 3.0 14400 < th dose independent rect. 1 2
800 327.71 humidity 80.0 270 > th dose dependent rect. 12 7
801 327.71 wind 5.0 10 > th dose dependent rect. 19 16
830 327.77 temperature 25.0 270 < th dose independent rect. 13 18
864 327.84 humidity 60.0 270 > th dose dependent rect. 15 3
899 327.94 atmosphere 1015.0 4320 > th dose independent rect. 8 1
901 327.94 atmosphere 1015.0 4320 < th dose independent rect. 9 1
907 327.95 humidity 80.0 4320 < th dose independent rect. 8 3
915 327.96 humidity 50.0 4320 < th dose dependent rect. 13 1
942 328.02 humidity 70.0 270 > th dose independent rect. 14 17
992 328.12 temperature 25.0 10 < th dose independent rect. 17 4