Os06g0281800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BURP domain containing protein.
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Os06g0281800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BURP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.01 | 0.266 | 2.84 | -0.127 | 0.047 | 4.93 | 0.123 | -11.4 | 0.0467 | 4.28 | 47.16 | 8 | -- | -- |
| 32.01 | 0.266 | 2.81 | -0.0524 | 0.047 | 0.556 | 0.122 | -- | 0.0467 | 4.28 | 47.16 | 8 | -- | -- |
| 32.03 | 0.264 | 2.84 | -0.123 | 0.0516 | 4.71 | -- | -10.8 | 0.0461 | 5.47 | 46.35 | 7 | -- | -- |
| 32.03 | 0.265 | 2.81 | -0.0527 | 0.0514 | 0.538 | -- | -- | 0.0459 | 5.49 | 46.23 | 7 | -- | -- |
| 32.17 | 0.264 | 2.84 | -0.121 | -- | 4.66 | -- | -10.7 | 0.0472 | -- | 46.28 | 7 | -- | -- |
| 32.87 | 0.269 | 2.81 | -0.0307 | 0.0501 | -- | 0.0357 | -- | 0.0441 | 6.23 | -- | -- | -- | -- |
| 32.87 | 0.268 | 2.81 | -0.0302 | 0.0503 | -- | -- | -- | 0.0441 | 6.44 | -- | -- | -- | -- |
| 32.17 | 0.265 | 2.81 | -0.0507 | -- | 0.533 | -- | -- | 0.0472 | -- | 45.87 | 8 | -- | -- |
| 32.1 | 0.265 | 2.81 | -- | 0.0505 | 0.519 | -- | -- | 0.0516 | 5.57 | 46.23 | 7 | -- | -- |
| 33 | 0.268 | 2.81 | -0.0289 | -- | -- | -- | -- | 0.0451 | -- | -- | -- | -- | -- |
| 32.9 | 0.268 | 2.81 | -- | 0.0499 | -- | -- | -- | 0.0474 | 6.47 | -- | -- | -- | -- |
| 32.24 | 0.265 | 2.81 | -- | -- | 0.515 | -- | -- | 0.0527 | -- | 45.87 | 8 | -- | -- |
| 33.03 | 0.268 | 2.81 | -- | -- | -- | -- | -- | 0.0483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.34 | radiation | 40 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 3 | 29.40 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 29 | 29.40 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 81 | 29.49 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 82 | 29.52 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 132 | 29.59 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 153 | 29.75 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 193 | 29.87 | radiation | 40 | 10 | > th | dose independent | rect. | 12 | 23 |
| 259 | 30.21 | radiation | 40 | 10 | > th | dose independent | sin | 12 | NA |
| 261 | 30.24 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 4 |
| 266 | 30.25 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 351 | 30.25 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 352 | 30.25 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 499 | 30.28 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 512 | 30.30 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 899 | 30.69 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |