Os06g0256800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0256800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.08 | 0.733 | 4.07 | -1.55 | 0.815 | 1.18 | 0.89 | -4.33 | -0.754 | 1.25 | 22.14 | 6936 | -- | -- |
| 249.49 | 0.736 | 3.95 | -1.09 | 0.823 | 1.64 | 0.847 | -- | -0.62 | 1.29 | 4.966 | 23871 | -- | -- |
| 245.89 | 0.73 | 4.11 | -1.76 | 0.811 | 1.3 | -- | -5.09 | -0.823 | 1.13 | 24.03 | 6909 | -- | -- |
| 252.1 | 0.739 | 3.95 | -1.12 | 0.815 | 1.62 | -- | -- | -0.632 | 1.02 | 4.399 | 24334 | -- | -- |
| 284.69 | 0.786 | 4.1 | -1.81 | -- | 1.42 | -- | -5.03 | -0.94 | -- | 24.18 | 8311 | -- | -- |
| 290.19 | 0.799 | 3.81 | 0.364 | 0.874 | -- | 0.903 | -- | -0.0155 | 1.25 | -- | -- | -- | -- |
| 293.43 | 0.802 | 3.81 | 0.334 | 0.872 | -- | -- | -- | -0.0196 | 1.05 | -- | -- | -- | -- |
| 292.59 | 0.797 | 3.95 | -1.18 | -- | 1.75 | -- | -- | -0.66 | -- | 7.258 | 24102 | -- | -- |
| 257.24 | 0.747 | 3.89 | -- | 0.804 | 1.28 | -- | -- | -0.357 | 0.973 | 8.014 | 8346 | -- | -- |
| 340.66 | 0.862 | 3.8 | 0.367 | -- | -- | -- | -- | -0.00256 | -- | -- | -- | -- | -- |
| 296.37 | 0.805 | 3.82 | -- | 0.877 | -- | -- | -- | -0.0568 | 1.06 | -- | -- | -- | -- |
| 295.75 | 0.801 | 3.89 | -- | -- | 1.19 | -- | -- | -0.394 | -- | 18.49 | 8241 | -- | -- |
| 344.22 | 0.866 | 3.81 | -- | -- | -- | -- | -- | -0.0433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 3 | 234.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 4 | 235.12 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 8 | 236.72 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 12 | 237.19 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 19 | 237.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 25 | 237.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 26 | 237.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 32 | 238.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 33 | 238.32 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 35 | 238.43 | wind | 7.0 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 38 | 238.54 | wind | 7.0 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 42 | 238.66 | wind | 7.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 44 | 238.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 48 | 238.78 | wind | 7.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 53 | 238.89 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 58 | 238.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 66 | 239.07 | wind | 7.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 67 | 239.12 | wind | 7.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 76 | 239.29 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 78 | 239.29 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 79 | 239.29 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 85 | 239.30 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 135 | 239.86 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 142 | 240.00 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 144 | 240.07 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 149 | 240.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 152 | 240.14 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 167 | 240.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 182 | 240.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 183 | 240.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 184 | 240.52 | wind | 7.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 194 | 240.62 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 236 | 240.86 | wind | 7.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 238 | 240.88 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 240 | 240.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 243 | 240.91 | radiation | 20.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 251 | 240.97 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 253 | 240.98 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 257 | 241.01 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 261 | 241.04 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 264 | 241.05 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 267 | 241.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 271 | 241.07 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 299 | 241.18 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 300 | 241.19 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 303 | 241.19 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 315 | 241.22 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 332 | 241.27 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 341 | 241.29 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 343 | 241.30 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 350 | 241.31 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 374 | 241.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 376 | 241.36 | temperature | 20.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 427 | 241.44 | temperature | 25.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 434 | 241.44 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 459 | 241.47 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 470 | 241.48 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 498 | 241.52 | temperature | 20.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 508 | 241.52 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 514 | 241.53 | temperature | 25.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 526 | 241.54 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 24 | 11 |
| 544 | 241.56 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 599 | 241.60 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 2 | 8 |
| 614 | 241.62 | wind | 7.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 721 | 241.71 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 7 | NA |