Os06g0256100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0256100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.96 | 0.592 | 2.94 | 0.215 | 0.14 | 7.42 | -0.923 | 21.4 | -0.031 | 8.21 | 10.62 | 245 | -- | -- |
| 163.26 | 0.595 | 2.9 | 0.0464 | 0.111 | 2.58 | -0.555 | -- | 0.0243 | 5.7 | 10.51 | 268 | -- | -- |
| 161.33 | 0.592 | 2.95 | 0.212 | 0.144 | 8 | -- | 24.5 | -0.0325 | 9.81 | 10.63 | 251 | -- | -- |
| 163.43 | 0.595 | 2.91 | 0.0599 | 0.0771 | 2.53 | -- | -- | -0.0197 | 5.6 | 10.65 | 245 | -- | -- |
| 162.55 | 0.594 | 2.96 | 0.219 | -- | 8.37 | -- | 26.2 | -0.0323 | -- | 10.64 | 265 | -- | -- |
| 172.68 | 0.616 | 2.92 | 0.0151 | 0.133 | -- | -0.708 | -- | -0.0546 | 9.51 | -- | -- | -- | -- |
| 174.34 | 0.618 | 2.92 | -0.00866 | 0.144 | -- | -- | -- | -0.054 | 11.2 | -- | -- | -- | -- |
| 163.69 | 0.596 | 2.91 | 0.0591 | -- | 2.5 | -- | -- | -0.0274 | -- | 10.65 | 243 | -- | -- |
| 162.49 | 0.594 | 2.91 | -- | 0.148 | 2.5 | -- | -- | -0.0347 | 9.55 | 10.64 | 232 | -- | -- |
| 175.63 | 0.619 | 2.92 | -0.0121 | -- | -- | -- | -- | -0.0553 | -- | -- | -- | -- | -- |
| 174.34 | 0.618 | 2.92 | -- | 0.144 | -- | -- | -- | -0.053 | 11.2 | -- | -- | -- | -- |
| 163.78 | 0.596 | 2.92 | -- | -- | 2.48 | -- | -- | -0.034 | -- | 10.65 | 245 | -- | -- |
| 175.63 | 0.619 | 2.92 | -- | -- | -- | -- | -- | -0.0539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.32 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 11 | 147.32 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 174 | 162.46 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 331 | 164.05 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 333 | 164.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 354 | 164.13 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 363 | 164.15 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 367 | 164.16 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 373 | 164.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 375 | 164.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 376 | 164.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 380 | 164.18 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 382 | 164.18 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 387 | 164.18 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 388 | 164.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 390 | 164.18 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 395 | 164.18 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 396 | 164.19 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 432 | 164.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 434 | 164.44 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 461 | 164.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 462 | 164.72 | wind | 9.0 | 270 | > th | dose dependent | sin | 1 | NA |
| 464 | 164.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 485 | 164.82 | wind | 9.0 | 90 | > th | dose dependent | sin | 19 | NA |
| 498 | 164.96 | wind | 9.0 | 270 | > th | dose independent | sin | 1 | NA |
| 566 | 165.06 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 571 | 165.06 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 592 | 165.14 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 623 | 165.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 624 | 165.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 627 | 165.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 631 | 165.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 640 | 165.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 641 | 165.22 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 661 | 165.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 704 | 165.31 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 707 | 165.32 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 10 |
| 712 | 165.33 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 13 |
| 714 | 165.35 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 731 | 165.38 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 8 |
| 748 | 165.41 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 10 |
| 833 | 165.62 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 8 |
| 838 | 165.64 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 849 | 165.72 | wind | 9.0 | 270 | < th | dose independent | sin | 0 | NA |
| 875 | 165.84 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 925 | 165.93 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 939 | 165.94 | wind | 1.0 | 10 | < th | dose dependent | rect. | 4 | 21 |