Os06g0255400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nudix hydrolase 18, mitochondrial precursor (EC 3.6.1.-) (AtNUDT18).
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Os06g0255400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nudix hydrolase 18, mitochondrial precursor (EC 3.6.1.-) (AtNUDT18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.03 | 0.46 | 10.5 | -0.181 | 2.14 | -0.882 | 1.01 | 0.0541 | -0.325 | 7.74 | 90.27 | 10 | -- | -- |
| 96.03 | 0.456 | 10.5 | -0.179 | 2.14 | -0.878 | 1.01 | -- | -0.325 | 7.73 | 90.23 | 9 | -- | -- |
| 98.82 | 0.463 | 10.5 | -0.155 | 2.13 | -0.843 | -- | -0.00354 | -0.322 | 7.73 | 89.9 | 9 | -- | -- |
| 98.82 | 0.463 | 10.5 | -0.156 | 2.13 | -0.844 | -- | -- | -0.323 | 7.72 | 89.89 | 9 | -- | -- |
| 329.12 | 0.85 | 10.6 | -0.192 | -- | -0.294 | -- | -0.831 | -0.176 | -- | 76.08 | 8 | -- | -- |
| 114.43 | 0.501 | 10.5 | -0.288 | 1.99 | -- | 0.847 | -- | -0.169 | 8.47 | -- | -- | -- | -- |
| 116.71 | 0.506 | 10.5 | -0.262 | 1.99 | -- | -- | -- | -0.169 | 8.45 | -- | -- | -- | -- |
| 331.83 | 0.852 | 10.6 | -0.229 | -- | -0.324 | -- | -- | -0.185 | -- | 75.79 | 4 | -- | -- |
| 99.45 | 0.464 | 10.5 | -- | 2.13 | -0.864 | -- | -- | -0.311 | 7.71 | 89.86 | 9 | -- | -- |
| 338.44 | 0.86 | 10.6 | -0.252 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 118.52 | 0.509 | 10.5 | -- | 1.99 | -- | -- | -- | -0.14 | 8.45 | -- | -- | -- | -- |
| 333.21 | 0.853 | 10.6 | -- | -- | -0.332 | -- | -- | -0.161 | -- | 75.84 | 2 | -- | -- |
| 340.13 | 0.861 | 10.5 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.65 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 2 | 93.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 3 | 93.81 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 4 | 93.91 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 5 | 93.94 | humidity | 90.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 13 | 94.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 16 | 94.50 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 47 | 94.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 11 |
| 50 | 94.90 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 60 | 95.16 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 78 | 95.28 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 86 | 95.41 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 90 | 95.43 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 98 | 95.45 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 123 | 95.63 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 155 | 95.79 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 159 | 95.81 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 160 | 95.84 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 164 | 95.86 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 194 | 95.92 | humidity | 90.0 | 30 | > th | dose independent | sin | 8 | NA |
| 231 | 96.04 | wind | 1.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 246 | 96.06 | humidity | 90.0 | 10 | > th | dose dependent | no | NA | NA |
| 274 | 96.10 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 293 | 96.19 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 348 | 96.37 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 407 | 96.61 | wind | 1.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 408 | 96.61 | humidity | 90.0 | 30 | > th | dose independent | rect. | 22 | 10 |
| 462 | 96.79 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 17 |
| 483 | 96.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 502 | 96.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 511 | 97.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 520 | 97.06 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 532 | 97.12 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 533 | 97.12 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 16 | 13 |
| 538 | 97.13 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 543 | 97.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 550 | 97.17 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 14 |
| 605 | 97.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 610 | 97.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 725 | 97.70 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 735 | 97.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 740 | 97.74 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 790 | 97.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 823 | 97.97 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 824 | 97.97 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 833 | 97.99 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 836 | 97.99 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 840 | 98.00 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 867 | 98.06 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 887 | 98.10 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 901 | 98.13 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 915 | 98.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 949 | 98.25 | temperature | 20.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 960 | 98.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 972 | 98.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 983 | 98.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 6 |