Os06g0251100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Membrane attack complex component/perforin/complement C9 family protein.
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Os06g0251100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Membrane attack complex component/perforin/complement C9 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.45 | 0.371 | 10.1 | 2.2 | 0.801 | -0.861 | 0.198 | -0.31 | 0.663 | 13.5 | 1.043 | 4440 | -- | -- |
| 62.48 | 0.368 | 10.1 | 2.14 | 0.774 | -0.843 | 0.252 | -- | 0.667 | 13.5 | 0.9003 | 4488 | -- | -- |
| 61.52 | 0.365 | 10.1 | 2.19 | 0.694 | -1.07 | -- | -0.902 | 0.706 | 13.5 | 0.17 | 4518 | -- | -- |
| 62.65 | 0.369 | 10.1 | 2.13 | 0.771 | -0.833 | -- | -- | 0.669 | 13.5 | 0.9013 | 4494 | -- | -- |
| 77.35 | 0.41 | 10.1 | 2.22 | -- | -1.64 | -- | -1.25 | 0.639 | -- | 1.36 | 4678 | -- | -- |
| 73.2 | 0.401 | 10 | 2.39 | 0.921 | -- | 0.222 | -- | 0.805 | 13.4 | -- | -- | -- | -- |
| 73.4 | 0.401 | 10 | 2.4 | 0.921 | -- | -- | -- | 0.806 | 13.4 | -- | -- | -- | -- |
| 78.78 | 0.413 | 10.1 | 2.03 | -- | -1.54 | -- | -- | 0.558 | -- | 1.784 | 4679 | -- | -- |
| 102.09 | 0.471 | 10 | -- | 0.976 | -1.7 | -- | -- | 0.312 | 14 | 0.01 | 47520 | -- | -- |
| 125.49 | 0.523 | 10 | 2.36 | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
| 224.77 | 0.701 | 10.1 | -- | 0.879 | -- | -- | -- | 0.539 | 13.3 | -- | -- | -- | -- |
| 133.13 | 0.537 | 10.2 | -- | -- | -1.84 | -- | -- | 0.0888 | -- | 0.02467 | 46480 | -- | -- |
| 272.42 | 0.77 | 10.1 | -- | -- | -- | -- | -- | 0.525 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.45 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 3 | 59.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 5 | 59.59 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 8 | 59.75 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 9 | 59.79 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 11 | 59.81 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 12 | 59.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 13 | 59.82 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 16 | 59.89 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 18 | 59.89 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 23 | 59.95 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 30 | 59.99 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 34 | 60.01 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 41 | 60.05 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 46 | 60.05 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 63 | 60.08 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 83 | 60.10 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 85 | 60.10 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 21 | 20 |
| 96 | 60.11 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 3 | NA |
| 119 | 60.12 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 2 | NA |
| 123 | 60.12 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 126 | 60.12 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 136 | 60.12 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 138 | 60.13 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 156 | 60.13 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 169 | 60.14 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 172 | 60.14 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 224 | 60.15 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 23 | 12 |
| 241 | 60.16 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 19 |
| 244 | 60.16 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 246 | 60.16 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 3 | NA |
| 363 | 60.19 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 5 | NA |
| 459 | 60.21 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 2 | 22 |
| 540 | 60.23 | atmosphere | 1005 | 43200 | < th | dose independent | no | NA | NA |
| 542 | 60.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 552 | 60.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 553 | 60.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 720 | 60.26 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 759 | 60.26 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 778 | 60.27 | atmosphere | 1015 | 43200 | < th | dose dependent | no | NA | NA |
| 810 | 60.27 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 826 | 60.27 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 832 | 60.27 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 997 | 60.30 | atmosphere | 995 | 43200 | > th | dose dependent | no | NA | NA |