BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0251100 Os06g0251100|Os06g0251100
(621 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628 507 e-144
AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607 409 e-114
AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613 360 e-99
AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562 352 3e-97
>AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628
Length = 627
Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust.
Identities = 282/621 (45%), Positives = 368/621 (59%), Gaps = 34/621 (5%)
Query: 20 VQRAVRCLGRGVDMAGDLRLKHCKDEGGC-----LVARSGEKXXXXXXXXXXXXXXXXXD 74
++ AV+ LG+G D+ D RLK+CKD G LV + D
Sbjct: 9 IETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQNVSAD 68
Query: 75 VKFGKGDRIRFKSDVLEFNKMSDLFNHRSSLPGKIPSGLFNSCFDFGSDSWASDAGDTRC 134
+ KG+R RF+SD+L+FNKMS+ FN RSS+ GKIPSG FN+ F F S SWA+DA + +
Sbjct: 69 INCDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANVKS 128
Query: 135 LAFDGYFISLLDLRL-DCRPLALAGHVVADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQ 193
L D ++L +L + + L L V VP++WDP +A FIE+YGTH+I G+S+GGQ
Sbjct: 129 LGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGGQ 188
Query: 194 DVVYVKQDKSSPLSPSVIKEHLDKLGDQLFTGTCTLPPSHCKSRDH----KFKVPEAFNV 249
DVV V+QDKSS L +++ HL LGDQLFTG+C L H + K PEAFNV
Sbjct: 189 DVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQPKFPEAFNV 248
Query: 250 FDAQMTRQRIEGMTAPMSCKEGVTVIYSKRGGDTAASNHSEWLPTVPLMPDAINFKLVPI 309
FD +Q + ++ + G+TVI +KRGGD A +HSEWL TVP PDAINF +PI
Sbjct: 249 FD---DKQTVAFNNFSINSQNGITVICAKRGGDGRAKSHSEWLITVPDKPDAINFNFIPI 305
Query: 310 TSLLKGVAGVGFLSHAINLYLRYKPPVAELRYFLDFQHHRLWAPVLSDLPLGLCSNRQGT 369
TSLLK V G G LSHA++LYLRYKPP+ +L+YFLDF R WAPV +DLP G N
Sbjct: 306 TSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFGAAPNMASA 365
Query: 370 NPALHFSL-----------VIVPKLPITGMRLHLEGKKNNRLGIHLQHLSTTPTFIAGGW 418
PALH + V K P+TGMR LEGKK NRL IHLQHL T T +
Sbjct: 366 YPALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIHLQHLDNTRTTVGEKI 425
Query: 419 SGRPPAWRGSEAIAD-ERYYEPVQRRMFAHVCTVPVKHDPRWLXXXXX-XXXXXXXYVVS 476
+ WRGS+ I D +RY+EP+ + F+HVCTVPVK+DP W+ ++V+
Sbjct: 426 TDE-HIWRGSDQITDNDRYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVT 484
Query: 477 GAQLHVKAHESTSVLHLRLLYTELPGHSVVQSRWAHXXXXXXAARMSGVKGSFLSMSFAS 536
GAQL VK H S SVLHLRL YT++ H VVQ+ W H ++ SG+ F SMS
Sbjct: 485 GAQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVH--GPIGTSQKSGI---FSSMSMP- 538
Query: 537 MXXXXXXXXXXXXXXXRLNVDSGVFXXXXXXXXXXQRLLKFVETSQVTMGPQDCPGYWLV 596
+ + +DSGVF +++KFV+ SQ+ GPQ PG+WLV
Sbjct: 539 LTSGSVHHNMIQKDKNEVVLDSGVF-PGGPPVPANNKIVKFVDLSQLCRGPQHSPGHWLV 597
Query: 597 TGAKLDVDKGRISLHVKFSLL 617
TG +L +DKG++ LHVKF+LL
Sbjct: 598 TGVRLYLDKGKLCLHVKFALL 618
>AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607
Length = 606
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/616 (40%), Positives = 341/616 (55%), Gaps = 53/616 (8%)
Query: 23 AVRCLGRGVDMAGDLRLKHCK---DEGGCLVARSGEKXXXXXXXXXXXXXXXXXDVKFGK 79
A+ +G G D+A DLRLK+CK + L + G+ +K K
Sbjct: 14 AIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVSKSIKCDK 73
Query: 80 GDRIRFKSDVLEFNKMSDLFNHRSSLPGKIPSGLFNSCFDFGSDSWASDAGDTRCLAFDG 139
G+R+RF+SD+L F +M++ FN SL GKIPSGLFN+ F+F S W DA T+ LAFDG
Sbjct: 74 GERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSS-CWQKDAAYTKNLAFDG 132
Query: 140 YFISLLDLRLDCRPLALAGHVVADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQDVVYVK 199
FISL + LD + L HV VP+ WDP+A+A FI+ YGTHIIV + MGG+DV+Y K
Sbjct: 133 VFISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVKMGGKDVIYAK 192
Query: 200 QDKSSPLSPSVIKEHLDKLGDQLFTGTCTLPPSHCKSRDHKFKVPEAFNVFDAQMTRQRI 259
Q SS L P +++ L ++ D+ F + + + KV + + R R
Sbjct: 193 QQHSSKLQPEDLQKRLKEVADKRFVEASVVHNTGSERVQASSKV-------ETKEQRLRF 245
Query: 260 EGMTA--PMSCKEGVTVIYSKRGG-DTAASNHSEWLPTVPLMPDAINFKLVPITSLLKGV 316
++ + KE + +RGG D H+EWL TV + PD I+ +PITSLL GV
Sbjct: 246 ADTSSLGSYANKEDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPITSLLNGV 305
Query: 317 AGVGFLSHAINLYLRYKPPVAELRYFLDFQHHRLWAPVLSDLPLGLCSNRQGTNPALHFS 376
G GFLSHAINLYLRYKPP+ EL FL+FQ R WAPV S+LPLG +Q + +L FS
Sbjct: 306 PGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLG-PQRKQQSCASLQFS 364
Query: 377 L-----------VIVPKLPITGMRLHLEGKKNNRLGIHLQHLSTTPTFIAGGWSGRPPAW 425
V V K PITGMRL+LEG+++NRL IHLQHLS+ P
Sbjct: 365 FFGPKLYVNTTPVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDDLNRSIR 424
Query: 426 RGSEAIADERYYEPVQRRMFAHVCTVPVKHDPRWLXXXXXXXXXXXXYVVSGAQLHVKAH 485
+ S D RYYE V + ++HVCT PV+ D VV+GAQLHV++H
Sbjct: 425 QESH---DRRYYEKVNWKNYSHVCTEPVESD-------------DDLSVVTGAQLHVESH 468
Query: 486 ESTSVLHLRLLYTELPGHSVVQ-SRWAHXXXXXXAARMSGVKGSFLSMSFASMXXXXXXX 544
+VL LRL ++ + G ++V+ S W A SG+ + +S F +
Sbjct: 469 GFKNVLFLRLCFSRVVGATLVKNSEWDEAVGF---APKSGLISTLISHHFTAAQKPPPRP 525
Query: 545 XXXXXXXXRLNVDSGVFXXXXXXXXXXQRLLKFVETSQVTMGPQDCPGYWLVTGAKLDVD 604
+N++S ++ +LLKFV+TS++T GPQ+ PGYW+V+GA+L V+
Sbjct: 526 AD-------VNINSAIYPGGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVE 578
Query: 605 KGRISLHVKFSLLAPV 620
KG+ISL VK+SL P+
Sbjct: 579 KGKISLKVKYSLFTPI 594
>AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613
Length = 612
Score = 360 bits (925), Expect = e-99, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 323/618 (52%), Gaps = 43/618 (6%)
Query: 21 QRAVRCLGRGVDMAGDLRLKHCKD--EGGCLVARSGEKXXXXXXXXXXXXXXXXXDVKFG 78
++AV +G G D+ D+R CK +G LV + +K
Sbjct: 16 EKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNRDLIFPGGIVVNNVSSSIKCD 75
Query: 79 KGDRIRFKSDVLEFNKMSDLFNHRSSLPGKIPSGLFNSCFDFGSDSWASDAGDTRCLAFD 138
KG+R R +SD+L FN+MS+ FN L GKIPSG+FN+ F F S W DA + LA+D
Sbjct: 76 KGERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAF-SKCWPKDASSVKTLAYD 134
Query: 139 GYFISLLDLRLDCRPLALAGHVVADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQDVVYV 198
G+FISL + + + L L V +VP++WD +A+A FIEKYGTH++VG++MGG+DV++V
Sbjct: 135 GWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDVIHV 194
Query: 199 KQDKSSPLSPSVIKEHLDKLGDQLFTGTCTLPPSHCKSRDHKFK-VPEAFNVFD--AQMT 255
KQ + S P I++ L GD+ F + P KS + P+ N+ Q
Sbjct: 195 KQMRKSNHEPEEIQKMLKHWGDERFC----VDPVESKSPASVYSGKPKEENLLQWGLQPF 250
Query: 256 RQRIEGMTAPMSCKEGVTVIYSKRGGDTAASNHSEWLPTVPLMPDAINFKLVPITSLLKG 315
+ + E + + +RGG +H WL TV P+ I+ VPITSLL G
Sbjct: 251 GTSVSSAVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCFVPITSLLSG 310
Query: 316 VAGVGFLSHAINLYLRYKPPVAELRYFLDFQHHRLWAPVLSDLPLGLCSNRQGTNPALHF 375
+ G GFLSHA+NLYLRYKPP+ EL FL+FQ R WAPV DLPLGL ++Q ++P+L F
Sbjct: 311 LPGTGFLSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGLRRSKQ-SSPSLQF 369
Query: 376 SLVIVPKL------------PITGMRLHLEGKKNNRLGIHLQHLSTTPTFIAGGWSGRPP 423
SL + PKL P+TG+R LEGKK N L IHLQHLS P +
Sbjct: 370 SL-MGPKLYVNTSKVDSGERPVTGLRFFLEGKKGNHLAIHLQHLSACPPSLH---LSHDD 425
Query: 424 AWRGSEAIADERYYEPVQRRMFAHVCTVPVKHDPRWLXXXXXXXXXXXXYVVSGAQLHVK 483
+ E ++ YY PV+ +F+HVCT PV+++ +V+ A L VK
Sbjct: 426 TYEPIEEPVEKGYYVPVKWGIFSHVCTYPVQYN--------GARSDDTASIVTKAWLEVK 477
Query: 484 AHESTSVLHLRLLYTELPGHSVVQSRWAHXXXXXXAARMSGVKGSFLSMSFASMXXXXXX 543
VL LRL ++ +S W + +R SGV SM +
Sbjct: 478 GMGMRKVLFLRLGFSLDASAVTRKSCWDNLSTN---SRKSGV----FSMISTRLSTGLSP 530
Query: 544 XXXXXXXXXRLNVDSGVFXXXXXXXXXXQRLLKFVETSQVTMGPQDCPGYWLVTGAKLDV 603
+++++S V+ +LL V+T +V GP++ PGYW+VTGAKL V
Sbjct: 531 NPATTKPQSKIDINSAVY-PRGPSPPVKPKLLSLVDTKEVMRGPEEQPGYWVVTGAKLCV 589
Query: 604 DKGRISLHVKFSLLAPVS 621
+ G+IS+ K+SLL +S
Sbjct: 590 EAGKISIKAKYSLLTVIS 607
>AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562
Length = 561
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 321/610 (52%), Gaps = 83/610 (13%)
Query: 20 VQRAVRCLGRGVDMAGDLRLKHCKDEGGCLVARSGE-KXXXXXXXXXXXXXXXXXDVKFG 78
++ A++ LGRG D+ D+RL +CK G + R E + D+
Sbjct: 21 LRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNRDLELSHGFLLPNVPADIDCS 80
Query: 79 KGDRIRFKSDVLEFNKMSDLFNHRSSLPGKIPSGLFNSCFDFGSDSWASDAGDTRCLAFD 138
+G+ + V F++M++ FN RS + G IP G FN+ F++ + SW DA T+ LA
Sbjct: 81 RGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNY-TGSWQVDAASTKSLALV 139
Query: 139 GYFISLLDLRLDCRPLALAGHVVADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQDVVYV 198
GYFI L D++L L L + VP++WDP+++ASFIE YGTHI+ +++GG+DVVY+
Sbjct: 140 GYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRDVVYI 199
Query: 199 KQDKSSPLSPSVIKEHLDKLGDQLFTGTCTLPPSHCKSRDHKFKVPEAFNVFDAQMTRQR 258
+Q +SSPL S I+ +++ + H+F E+
Sbjct: 200 RQHQSSPLPVSEIENYVNDM------------------IKHRFHEAES------------ 229
Query: 259 IEGMTAPMSCKE-GVTVIYSKRGGDTAASNHSEWLPTVPLMPDAINFKLVPITSLLKGVA 317
+ +T P+ K+ +TVI+ +RGGD +H+ W TVP PD IN PI SLL+GV
Sbjct: 230 -QSITGPLKYKDKDITVIFRRRGGDDLEQSHARWAETVPAAPDIINMTFTPIVSLLEGVP 288
Query: 318 GVGFLSHAINLYLRYKPPVAELRYFLDFQHHRLWAPVLSDLPLG--LCSNRQGT--NPAL 373
G+ L+ AI LYL YKPP+ +L+YFLD+Q R WAP S+L +CS+ Q + P L
Sbjct: 289 GLRHLTRAIELYLEYKPPIEDLQYFLDYQIARAWAPEQSNLQRKEPVCSSLQFSLMGPKL 348
Query: 374 HFSL--VIVPKLPITGMRLHLEGKKNNRLGIHLQHLSTTPTFIAGGWSGR----PPAWRG 427
S V V + P+TG+RL LEG K NRL IHLQHL + P + W P W+G
Sbjct: 349 FISADQVTVGRKPVTGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVPIGAPKWQG 408
Query: 428 SEAIADERYYEPVQRRMFAHVCTVPVKHDPRWLXXXXXXXXXXXXYVVSGAQLHVKAHES 487
E D R++EP++ + F+HV T P++H ++V+GAQL V S
Sbjct: 409 PEE-QDSRWFEPIKWKNFSHVSTSPIEH------TETHIGDLSGVHIVTGAQLGVWDFGS 461
Query: 488 TSVLHLRLLYTELPGHSVVQSRWAHXXXXXXAARMSGVKGSFLSMSFASMXXXXXXXXXX 547
+VLHL+LL++++PG ++ +S W H AS
Sbjct: 462 KNVLHLKLLFSKVPGCTIRRSVWDH-------------------TPVASSGRLEPGGPST 502
Query: 548 XXXXXRLNVDSGVFXXXXXXXXXXQRLLKFVETSQVTMGPQDCPGYWLVTGAKLDVDKGR 607
++ SG +L K V++S++ GPQD PG+WLVTGAKL V+KG+
Sbjct: 503 SSSTEEVSGQSG-------------KLAKIVDSSEMLKGPQDLPGHWLVTGAKLGVEKGK 549
Query: 608 ISLHVKFSLL 617
I L VK+SLL
Sbjct: 550 IVLRVKYSLL 559
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,567,160
Number of extensions: 514099
Number of successful extensions: 901
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 874
Number of HSP's successfully gapped: 5
Length of query: 621
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 516
Effective length of database: 8,227,889
Effective search space: 4245590724
Effective search space used: 4245590724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)