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Os06g0248400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Poly(ADP-ribose) polymerase, catalytic region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0158) R2 : 0.245
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.404 (0.0332) R2dN8 : 0.317 R2N8 : 0.245
σ : 0.297
deviance : 40.41
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.83 0.248 10.7 -0.374 0.284 0.346 0.489 0.329 0.391 1.31 70 1246 -- --
27.87 0.246 10.7 -0.319 0.306 0.379 0.437 -- 0.408 1.14 70.02 1178 -- --
28.47 0.249 10.7 -0.348 0.3 0.379 -- 0.0176 0.408 1.32 71 1174 -- --
28.46 0.248 10.7 -0.345 0.309 0.386 -- -- 0.408 1.26 71.62 1174 -- --
30.4 0.257 10.7 -0.407 -- 0.508 -- 0.0389 0.438 -- 75 3189 -- --
32.87 0.269 10.7 -0.408 0.203 -- 0.361 -- 0.356 1.43 -- -- -- --
33.38 0.271 10.7 -0.421 0.205 -- -- -- 0.353 1.76 -- -- -- --
30.39 0.257 10.7 -0.396 -- 0.537 -- -- 0.446 -- 75.55 3193 -- --
31.55 0.262 10.7 -- 0.326 0.43 -- -- 0.439 1.34 71.9 1176 -- --
35.93 0.28 10.7 -0.412 -- -- -- -- 0.358 -- -- -- -- --
38.04 0.289 10.7 -- 0.197 -- -- -- 0.4 1.7 -- -- -- --
34.5 0.274 10.7 -- -- 0.549 -- -- 0.489 -- 75.66 3153 -- --
40.41 0.297 10.7 -- -- -- -- -- 0.404 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.75 temperature 15.0 90 > th dose dependent rect. 20 8
2 24.94 temperature 10.0 270 > th dose dependent rect. 18 8
5 25.18 temperature 20.0 90 > th dose independent rect. 20 8
35 26.21 temperature 20.0 90 > th dose independent rect. 7 21
40 26.34 atmosphere 1015.0 270 < th dose independent rect. 17 9
52 26.56 humidity 80.0 270 > th dose independent rect. 7 19
60 26.66 precipitation 0.1 14400 < th dose independent rect. 15 2
62 26.66 precipitation 0.1 14400 < th dose dependent rect. 15 2
64 26.67 wind 3.0 14400 < th dose independent rect. 3 1
65 26.67 precipitation 0.1 14400 > th dose independent rect. 15 2
76 26.74 wind 3.0 14400 < th dose dependent rect. 3 3
80 26.77 precipitation 0.1 14400 > th dose dependent rect. 15 2
81 26.77 humidity 50.0 270 > th dose dependent rect. 17 9
91 26.86 atmosphere 1015.0 90 < th dose independent rect. 20 8
93 26.88 wind 3.0 14400 > th dose independent rect. 3 1
98 26.90 wind 3.0 14400 < th dose independent rect. 3 3
103 26.95 humidity 60.0 14400 > th dose independent rect. 15 2
105 26.95 precipitation 0.1 14400 > th dose independent rect. 11 6
108 26.96 wind 9.0 14400 < th dose independent rect. 6 5
113 26.97 wind 3.0 14400 > th dose independent rect. 3 3
118 26.98 precipitation 0.1 14400 < th dose independent rect. 11 6
121 26.98 precipitation 0.1 14400 < th dose dependent rect. 11 6
144 27.04 wind 3.0 14400 < th dose independent rect. 24 6
146 27.04 humidity 70.0 270 > th dose dependent rect. 6 20
171 27.13 precipitation 0.1 14400 > th dose dependent rect. 11 6
180 27.16 humidity 60.0 14400 < th dose independent rect. 15 2
181 27.16 humidity 60.0 14400 > th dose independent rect. 15 18
185 27.17 radiation 1.0 30 > th dose independent rect. 16 15
186 27.17 temperature 20.0 270 > th dose independent rect. 7 18
192 27.18 atmosphere 1015.0 270 < th dose independent rect. 6 20
213 27.23 wind 3.0 14400 > th dose independent rect. 24 6
231 27.29 wind 9.0 14400 < th dose independent rect. 10 1
234 27.29 humidity 60.0 14400 < th dose independent rect. 14 20
246 27.32 humidity 80.0 14400 > th dose independent rect. 13 1
249 27.32 humidity 60.0 14400 > th dose independent rect. 15 9
256 27.32 temperature 20.0 90 > th dose independent rect. 20 19
285 27.36 wind 9.0 14400 > th dose independent rect. 10 1
288 27.36 humidity 80.0 90 > th dose independent rect. 19 9
302 27.38 precipitation 0.1 14400 > th dose dependent rect. 18 1
306 27.39 precipitation 0.1 270 < th dose independent rect. 2 15
307 27.39 precipitation 0.1 30 < th dose independent rect. 16 15
310 27.39 precipitation 0.1 270 < th dose dependent rect. 2 15
311 27.39 precipitation 0.1 30 < th dose dependent rect. 16 15
313 27.40 humidity 80.0 14400 > th dose independent rect. 10 1
317 27.41 humidity 60.0 14400 < th dose independent rect. 14 6
330 27.41 radiation 1.0 30 < th dose dependent sin 12 NA
334 27.42 humidity 60.0 14400 < th dose dependent rect. 14 6
359 27.44 precipitation 0.1 14400 < th dose independent rect. 14 6
374 27.44 precipitation 0.1 14400 < th dose dependent rect. 14 6
379 27.45 precipitation 0.1 14400 > th dose independent rect. 15 5
382 27.45 precipitation 0.1 14400 > th dose independent rect. 12 8
383 27.45 precipitation 0.1 14400 < th dose independent rect. 12 8
390 27.45 precipitation 0.1 14400 < th dose dependent rect. 12 8
393 27.46 wind 3.0 43200 < th dose independent rect. 6 1
399 27.46 wind 7.0 270 < th dose independent rect. 17 9
401 27.46 wind 5.0 90 < th dose independent rect. 7 21
413 27.47 precipitation 0.1 14400 < th dose independent rect. 9 11
414 27.47 precipitation 0.1 14400 < th dose independent rect. 3 17
419 27.47 precipitation 0.1 14400 < th dose dependent rect. 9 11
420 27.47 precipitation 0.1 14400 < th dose dependent rect. 3 17
421 27.48 humidity 80.0 14400 < th dose independent rect. 13 1
425 27.48 precipitation 0.1 14400 > th dose independent rect. 7 13
426 27.48 precipitation 0.1 14400 < th dose independent rect. 7 13
427 27.48 precipitation 0.1 14400 > th dose independent rect. 3 17
433 27.48 precipitation 0.1 14400 < th dose dependent rect. 7 13
435 27.49 precipitation 0.1 14400 < th dose independent rect. 18 1
439 27.49 precipitation 0.1 14400 < th dose dependent rect. 18 1
449 27.51 precipitation 0.1 14400 > th dose independent rect. 18 1
452 27.51 atmosphere 995.0 30 > th dose independent rect. 7 9
470 27.52 humidity 80.0 14400 > th dose dependent rect. 9 1
474 27.53 humidity 80.0 270 > th dose independent rect. 17 9
476 27.53 precipitation 0.1 14400 < th dose independent rect. 5 15
479 27.53 wind 1.0 14400 > th dose dependent rect. 3 3
482 27.53 precipitation 0.1 14400 < th dose dependent rect. 5 15
493 27.54 radiation 10.0 270 < th dose dependent rect. 17 9
502 27.55 atmosphere 1015.0 270 < th dose independent rect. 7 18
510 27.56 wind 9.0 10 < th dose independent rect. 7 9
513 27.56 precipitation 0.1 4320 < th dose independent rect. 2 15
520 27.56 precipitation 0.1 4320 < th dose dependent rect. 2 15
525 27.57 radiation 30.0 10 < th dose independent rect. 16 15
527 27.57 precipitation 0.1 4320 > th dose independent rect. 2 15
531 27.57 temperature 20.0 10 > th dose independent rect. 20 20
540 27.58 humidity 80.0 14400 > th dose independent rect. 10 5
542 27.58 temperature 10.0 30 > th dose independent rect. 7 9
544 27.58 atmosphere 1015.0 30 < th dose independent rect. 7 9
545 27.58 temperature 10.0 30 > th dose independent rect. 16 15
562 27.59 precipitation 0.1 10 < th dose independent rect. 7 9
570 27.59 atmosphere 1015.0 10 < th dose independent rect. 7 22
573 27.59 precipitation 0.1 10 < th dose dependent rect. 7 9
579 27.60 wind 9.0 14400 > th dose independent rect. 7 4
581 27.60 humidity 50.0 270 > th dose independent rect. 17 9
582 27.60 radiation 10.0 270 < th dose independent rect. 17 9
597 27.61 temperature 20.0 90 > th dose independent rect. 20 16
620 27.62 wind 9.0 90 < th dose dependent rect. 7 21
660 27.65 atmosphere 995.0 270 > th dose independent rect. 17 9
663 27.65 humidity 60.0 14400 < th dose dependent sin 14 NA
671 27.66 humidity 60.0 14400 > th dose independent sin 12 NA
672 27.66 humidity 80.0 14400 < th dose independent rect. 10 1
677 27.66 temperature 20.0 10 > th dose independent rect. 20 18
690 27.67 temperature 10.0 1440 > th dose independent rect. 8 9
693 27.67 temperature 10.0 270 > th dose independent rect. 17 9
698 27.67 temperature 10.0 270 > th dose independent rect. 2 15
699 27.67 temperature 10.0 1440 > th dose independent rect. 17 15
702 27.67 atmosphere 1015.0 270 < th dose independent rect. 2 15
728 27.68 humidity 80.0 90 > th dose independent rect. 11 17
731 27.68 precipitation 0.1 14400 > th dose independent rect. 23 21
756 27.70 precipitation 0.1 14400 > th dose independent sin 0 NA
757 27.70 precipitation 0.1 14400 < th dose independent sin 0 NA
760 27.70 radiation 1.0 270 < th dose independent rect. 6 20
762 27.70 precipitation 0.1 14400 < th dose dependent sin 0 NA
769 27.70 precipitation 0.1 14400 > th dose dependent rect. 23 21
799 27.72 wind 3.0 14400 < th dose dependent sin 8 NA
800 27.72 temperature 30.0 43200 > th dose dependent rect. 8 1
824 27.73 wind 9.0 30 < th dose independent rect. 16 15
835 27.73 radiation 1.0 270 < th dose dependent rect. 6 20
858 27.74 precipitation 0.1 14400 > th dose dependent rect. 2 18
859 27.74 precipitation 0.1 4320 > th dose dependent rect. 23 18
880 27.76 wind 1.0 14400 > th dose independent rect. 3 9
892 27.76 radiation 1.0 270 < th dose dependent rect. 15 11
903 27.77 precipitation 0.1 270 < th dose independent rect. 14 16
915 27.77 precipitation 0.1 270 < th dose dependent rect. 14 16
919 27.78 humidity 80.0 14400 < th dose independent rect. 10 5
956 27.80 humidity 60.0 14400 < th dose independent sin 12 NA
964 27.80 atmosphere 995.0 30 > th dose independent rect. 16 15
977 27.80 radiation 1.0 270 < th dose dependent rect. 13 13
979 27.80 radiation 1.0 270 < th dose dependent rect. 11 15
982 27.81 temperature 30.0 43200 > th dose independent rect. 8 1