Os06g0239000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose-inhibited division protein B-like protein.
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Os06g0239000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose-inhibited division protein B-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.6 | 0.238 | 10.4 | 0.0145 | 0.626 | 0.942 | -0.475 | 0.535 | -0.272 | 19.3 | 23.73 | 10 | -- | -- |
| 25.78 | 0.238 | 10.4 | -0.0586 | 0.633 | 0.999 | -0.444 | -- | -0.294 | 19.4 | 23.73 | 10 | -- | -- |
| 26.12 | 0.24 | 10.4 | 0.0291 | 0.638 | 0.954 | -- | 0.599 | -0.28 | 19.4 | 23.15 | 9 | -- | -- |
| 26.3 | 0.24 | 10.4 | -0.05 | 0.631 | 1 | -- | -- | -0.296 | 19.5 | 23.73 | 10 | -- | -- |
| 36.68 | 0.282 | 10.4 | 0.00498 | -- | 1.17 | -- | 0.561 | -0.294 | -- | 23.84 | 267 | -- | -- |
| 41.68 | 0.303 | 10.4 | 0.12 | 0.848 | -- | -0.265 | -- | -0.164 | 17.8 | -- | -- | -- | -- |
| 41.85 | 0.303 | 10.4 | 0.122 | 0.847 | -- | -- | -- | -0.165 | 17.7 | -- | -- | -- | -- |
| 36.43 | 0.281 | 10.4 | -0.113 | -- | 1.23 | -- | -- | -0.323 | -- | 23.73 | 266 | -- | -- |
| 26.37 | 0.24 | 10.4 | -- | 0.633 | 0.991 | -- | -- | -0.289 | 19.5 | 23.73 | 10 | -- | -- |
| 79.04 | 0.415 | 10.4 | 0.0956 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 42.24 | 0.304 | 10.4 | -- | 0.845 | -- | -- | -- | -0.178 | 17.8 | -- | -- | -- | -- |
| 36.77 | 0.282 | 10.4 | -- | -- | 1.21 | -- | -- | -0.307 | -- | 23.8 | 267 | -- | -- |
| 79.28 | 0.416 | 10.4 | -- | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.56 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 2 | 24.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 5 | 24.76 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 10 | 24.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 19 | 25.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 37 | 25.45 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 41 | 25.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 45 | 25.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 53 | 25.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 56 | 25.64 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 64 | 25.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 82 | 25.83 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 88 | 25.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 94 | 25.89 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 96 | 25.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 97 | 25.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 99 | 25.90 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 127 | 26.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 168 | 26.13 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 172 | 26.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 197 | 26.20 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 255 | 26.35 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 302 | 26.48 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 375 | 26.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 386 | 26.68 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 569 | 27.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 770 | 27.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 11 |
| 776 | 27.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 780 | 27.51 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 19 |
| 819 | 27.56 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 837 | 27.59 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 15 |
| 858 | 27.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 885 | 27.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 956 | 27.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 984 | 27.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |