Os06g0237000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0237000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.82 | 0.601 | 9.46 | 1.16 | 3.64 | 1.53 | 0.269 | -1.97 | -0.328 | 17.4 | 25.48 | 10 | -- | -- |
| 164.93 | 0.603 | 9.43 | 1.37 | 3.67 | 1.38 | 0.0626 | -- | -0.273 | 17.4 | 25.48 | 10 | -- | -- |
| 163.81 | 0.601 | 9.46 | 1.19 | 3.65 | 1.53 | -- | -1.71 | -0.32 | 17.4 | 25.48 | 10 | -- | -- |
| 164.94 | 0.602 | 9.43 | 1.37 | 3.67 | 1.38 | -- | -- | -0.273 | 17.4 | 25.48 | 10 | -- | -- |
| 577.83 | 1.12 | 9.58 | -0.255 | -- | 4.61 | -- | -7.17 | -0.933 | -- | 24.5 | 255 | -- | -- |
| 192.64 | 0.651 | 9.42 | 1.57 | 4.07 | -- | 0.453 | -- | -0.192 | 17.1 | -- | -- | -- | -- |
| 193.16 | 0.651 | 9.42 | 1.57 | 4.08 | -- | -- | -- | -0.189 | 17.1 | -- | -- | -- | -- |
| 598.25 | 1.14 | 9.46 | 0.729 | -- | 4.09 | -- | -- | -0.685 | -- | 24.4 | 253 | -- | -- |
| 212.26 | 0.679 | 9.47 | -- | 3.52 | 1.71 | -- | -- | -0.457 | 17.5 | 25.27 | 13 | -- | -- |
| 1064.23 | 1.52 | 9.37 | 1.42 | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
| 257.86 | 0.751 | 9.45 | -- | 4.05 | -- | -- | -- | -0.364 | 17.1 | -- | -- | -- | -- |
| 613.66 | 1.15 | 9.47 | -- | -- | 4.18 | -- | -- | -0.758 | -- | 24.4 | 253 | -- | -- |
| 1117.48 | 1.56 | 9.4 | -- | -- | -- | -- | -- | -0.451 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 2 | 151.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 14 | 154.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 17 | 154.50 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 14 |
| 20 | 155.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 22 | 155.24 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 16 |
| 27 | 155.42 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 14 |
| 33 | 155.72 | temperature | 30 | 30 | < th | dose dependent | sin | 1 | NA |
| 34 | 155.73 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 17 | 13 |
| 39 | 156.15 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 17 |
| 44 | 156.26 | temperature | 25 | 30 | > th | dose dependent | sin | 3 | NA |
| 47 | 156.39 | temperature | 20 | 90 | < th | dose dependent | rect. | 16 | 9 |
| 54 | 156.57 | temperature | 20 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 59 | 156.67 | temperature | 20 | 90 | < th | dose dependent | rect. | 13 | 12 |
| 71 | 156.85 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 19 |
| 78 | 156.97 | temperature | 20 | 90 | < th | dose dependent | rect. | 23 | 2 |
| 88 | 157.27 | temperature | 20 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 104 | 157.43 | temperature | 25 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 140 | 157.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 141 | 157.75 | temperature | 20 | 10 | < th | dose dependent | rect. | 22 | 4 |
| 145 | 157.78 | temperature | 20 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 149 | 157.85 | temperature | 20 | 10 | < th | dose dependent | rect. | 24 | 1 |
| 216 | 158.52 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 18 | 4 |
| 270 | 158.98 | temperature | 10 | 30 | > th | dose dependent | sin | 1 | NA |
| 302 | 159.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 364 | 160.21 | temperature | 20 | 30 | < th | dose dependent | sin | 15 | NA |
| 381 | 160.46 | temperature | 25 | 90 | < th | dose independent | sin | 2 | NA |
| 394 | 160.60 | temperature | 15 | 270 | > th | dose independent | rect. | 17 | 13 |
| 412 | 160.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 454 | 161.23 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 499 | 161.77 | humidity | 60 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 508 | 161.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 519 | 161.98 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 11 | 11 |
| 573 | 162.45 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 618 | 162.83 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 634 | 163.00 | temperature | 15 | 720 | > th | dose independent | rect. | 11 | 10 |
| 647 | 163.08 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 718 | 163.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 728 | 163.59 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 748 | 163.68 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 749 | 163.69 | temperature | 15 | 720 | > th | dose independent | rect. | 17 | 6 |
| 769 | 163.77 | humidity | 70 | 90 | > th | dose independent | rect. | 3 | 19 |
| 831 | 164.02 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 13 | 9 |
| 839 | 164.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 864 | 164.13 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |