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Os06g0224100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.93 (0.0232) R2 : 0.631
β1 : 0.949 (0.0849) R2dD : 0.105 R2D : 0.0471
β2 : 1.39 (0.055) R2dC : 0.52 R2C : 0.492
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.373 (0.0495) R2dN8 : 0.0617 R2N8 : 0.0153
σ : 0.436
deviance : 86.66
__
_____
C
peak time of C : 12.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.49 0.383 9.91 0.951 1.97 0.768 -0.421 -1.03 0.419 12.6 19.66 85 -- --
68.24 0.385 9.91 0.949 1.98 0.772 0.411 -- 0.424 12.6 18.93 79 -- --
66.64 0.38 9.91 0.959 1.99 0.776 -- -0.701 0.418 12.5 19.63 79 -- --
68.83 0.386 9.91 0.98 1.99 0.774 -- -- 0.413 12.6 19.15 80 -- --
178.16 0.625 9.95 0.852 -- -0.573 -- -0.638 0.363 -- 19.63 79 -- --
86.25 0.435 9.93 0.937 1.4 -- 0.309 -- 0.372 12.5 -- -- -- --
86.66 0.436 9.93 0.949 1.39 -- -- -- 0.373 12.5 -- -- -- --
85.16 0.432 9.97 0.853 -- -1.06 -- -- 0.283 -- 0.01753 127 -- --
94.75 0.453 9.93 -- 1.92 0.764 -- -- 0.384 12.5 19.98 83 -- --
208.71 0.675 9.95 0.9 -- -- -- -- 0.35 -- -- -- -- --
110.38 0.491 9.95 -- 1.38 -- -- -- 0.268 12.5 -- -- -- --
87.68 0.436 9.98 -- -- -1.2 -- -- 0.203 -- 0.009997 95 -- --
230.09 0.708 9.98 -- -- -- -- -- 0.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.84 temperature 10.0 90 > th dose dependent rect. 4 15
5 55.70 radiation 20.0 90 < th dose independent rect. 4 15
8 56.71 radiation 40.0 90 < th dose independent rect. 4 15
10 57.49 radiation 1.0 90 < th dose dependent sin 13 NA
13 57.72 temperature 10.0 10 > th dose dependent rect. 5 15
15 57.81 radiation 40.0 90 < th dose dependent rect. 4 15
22 58.41 radiation 40.0 270 < th dose independent rect. 13 18
25 58.47 radiation 1.0 270 < th dose independent rect. 17 10
26 58.48 precipitation 0.1 270 < th dose independent rect. 3 15
27 58.48 precipitation 0.1 270 < th dose dependent rect. 3 15
29 58.56 radiation 1.0 270 < th dose dependent rect. 17 10
30 58.65 wind 1.0 270 > th dose independent rect. 7 6
35 58.81 temperature 10.0 270 > th dose independent rect. 7 6
36 58.81 atmosphere 995.0 270 > th dose independent rect. 7 6
37 58.81 atmosphere 1015.0 270 < th dose independent rect. 7 6
38 58.81 temperature 10.0 270 > th dose independent rect. 13 18
39 58.82 precipitation 0.1 270 < th dose independent rect. 13 18
40 58.82 precipitation 0.1 270 < th dose dependent rect. 13 18
42 58.86 precipitation 0.1 270 < th dose independent rect. 7 6
43 58.86 precipitation 0.1 270 < th dose dependent rect. 7 6
46 58.95 radiation 40.0 270 < th dose independent rect. 11 21
49 58.99 wind 9.0 270 < th dose independent rect. 7 6
52 59.02 temperature 10.0 270 > th dose independent rect. 18 9
53 59.02 humidity 50.0 270 > th dose independent rect. 18 9
57 59.02 temperature 10.0 270 > th dose independent rect. 3 15
58 59.02 atmosphere 1015.0 270 < th dose independent rect. 3 15
62 59.02 radiation 40.0 10 < th dose dependent rect. 5 14
63 59.04 radiation 40.0 10 < th dose independent rect. 5 15
66 59.06 wind 9.0 270 < th dose independent rect. 18 9
72 59.19 wind 9.0 270 < th dose independent rect. 13 18
75 59.24 radiation 10.0 270 < th dose independent rect. 2 6
79 59.36 atmosphere 995.0 270 > th dose independent rect. 18 9
85 59.54 precipitation 0.1 270 < th dose independent rect. 18 9
86 59.54 precipitation 0.1 270 < th dose dependent rect. 18 9
94 59.63 humidity 50.0 270 > th dose independent rect. 7 6
100 59.69 radiation 10.0 270 < th dose independent rect. 2 16
107 59.77 wind 9.0 270 < th dose independent rect. 3 15
110 59.85 radiation 1.0 270 < th dose dependent rect. 6 21
122 60.11 temperature 30.0 270 < th dose independent rect. 7 8
125 60.18 temperature 30.0 270 < th dose independent rect. 7 6
126 60.19 radiation 1.0 90 > th dose independent sin 13 NA
127 60.20 radiation 1.0 90 < th dose independent sin 13 NA
153 60.44 radiation 1.0 270 < th dose independent rect. 7 20
154 60.46 radiation 1.0 270 > th dose independent rect. 7 6
156 60.46 temperature 30.0 90 < th dose independent rect. 9 19
161 60.50 radiation 30.0 270 < th dose dependent rect. 2 6
162 60.51 atmosphere 995.0 270 > th dose independent rect. 13 18
165 60.52 radiation 1.0 270 > th dose independent rect. 13 18
168 60.54 radiation 1.0 10 < th dose dependent sin 11 NA
172 60.58 temperature 10.0 270 > th dose dependent rect. 2 6
174 60.62 radiation 20.0 90 < th dose independent rect. 15 18
216 60.84 radiation 20.0 90 < th dose independent rect. 14 21
221 60.87 radiation 20.0 90 < th dose independent rect. 4 7
229 60.93 radiation 10.0 270 < th dose dependent rect. 3 4
235 61.04 temperature 30.0 270 < th dose independent rect. 18 9
245 61.09 atmosphere 1010.0 270 < th dose independent rect. 2 5
253 61.17 humidity 70.0 270 > th dose independent rect. 2 5
281 61.21 radiation 40.0 270 < th dose independent rect. 2 16
303 61.37 humidity 70.0 270 > th dose independent rect. 1 7
305 61.38 wind 9.0 270 < th dose independent rect. 2 5
306 61.38 temperature 10.0 270 > th dose independent rect. 2 5
308 61.38 temperature 30.0 270 < th dose independent rect. 2 5
309 61.38 humidity 50.0 270 > th dose independent rect. 2 5
311 61.38 atmosphere 995.0 270 > th dose independent rect. 2 5
314 61.38 temperature 10.0 270 > th dose independent rect. 7 19
317 61.39 precipitation 0.1 270 < th dose independent rect. 2 5
318 61.39 precipitation 0.1 270 < th dose dependent rect. 2 5
322 61.41 wind 9.0 270 < th dose independent rect. 7 19
342 61.55 temperature 10.0 270 > th dose dependent rect. 12 20
348 61.59 wind 1.0 270 > th dose independent rect. 18 9
375 61.70 atmosphere 995.0 270 > th dose dependent rect. 7 7
377 61.71 temperature 20.0 720 > th dose dependent rect. 4 4
380 61.73 temperature 10.0 270 > th dose dependent rect. 4 2
438 61.96 humidity 50.0 270 > th dose dependent rect. 2 5
458 62.07 wind 9.0 270 < th dose independent rect. 1 7
459 62.07 temperature 10.0 270 > th dose independent rect. 1 7
461 62.07 temperature 30.0 270 < th dose independent rect. 1 7
462 62.07 humidity 50.0 270 > th dose independent rect. 1 7
464 62.07 atmosphere 995.0 270 > th dose independent rect. 1 7
467 62.07 atmosphere 995.0 270 > th dose independent rect. 3 15
468 62.07 temperature 10.0 270 > th dose independent rect. 8 17
469 62.08 precipitation 0.1 270 < th dose independent rect. 1 7
470 62.08 precipitation 0.1 270 < th dose dependent rect. 1 7
475 62.10 wind 9.0 270 < th dose independent rect. 8 17
483 62.13 wind 9.0 270 < th dose dependent rect. 2 5
507 62.27 radiation 40.0 90 < th dose dependent rect. 4 7
519 62.30 wind 1.0 270 > th dose independent rect. 7 19
525 62.33 wind 9.0 270 < th dose independent rect. 3 3
526 62.33 temperature 10.0 270 > th dose independent rect. 3 3
528 62.33 temperature 30.0 270 < th dose independent rect. 3 3
529 62.33 humidity 50.0 270 > th dose independent rect. 3 3
532 62.33 atmosphere 995.0 270 > th dose independent rect. 3 3
537 62.33 temperature 10.0 270 > th dose independent rect. 6 21
540 62.35 precipitation 0.1 270 < th dose independent rect. 3 3
542 62.35 precipitation 0.1 270 < th dose dependent rect. 3 3
566 62.44 wind 9.0 270 < th dose independent rect. 6 21
574 62.45 precipitation 0.1 270 < th dose independent rect. 7 19
576 62.45 precipitation 0.1 270 < th dose dependent rect. 7 19
643 62.72 radiation 40.0 270 < th dose dependent rect. 2 16
644 62.73 wind 1.0 270 > th dose independent rect. 8 17
667 62.80 temperature 10.0 270 > th dose dependent rect. 12 7
725 63.03 atmosphere 995.0 270 > th dose independent rect. 7 19
767 63.18 radiation 40.0 90 < th dose dependent rect. 15 18
778 63.22 precipitation 0.1 270 < th dose independent rect. 8 17
782 63.22 radiation 10.0 270 < th dose dependent rect. 3 12
783 63.22 precipitation 0.1 270 < th dose dependent rect. 8 17
791 63.24 atmosphere 1015.0 270 < th dose independent rect. 7 19
809 63.33 radiation 1.0 10 > th dose dependent rect. 8 7
818 63.37 temperature 10.0 10 > th dose dependent rect. 15 18
846 63.43 humidity 50.0 270 > th dose independent rect. 7 19
861 63.46 atmosphere 1015.0 90 < th dose dependent rect. 4 15
863 63.47 radiation 40.0 90 < th dose independent rect. 13 22
892 63.51 radiation 10.0 270 < th dose dependent rect. 3 10
901 63.56 atmosphere 1015.0 270 < th dose independent rect. 8 17
903 63.56 radiation 1.0 90 > th dose dependent rect. 8 6
920 63.61 atmosphere 995.0 90 > th dose independent rect. 9 19
969 63.76 humidity 50.0 90 > th dose independent rect. 9 19
982 63.80 radiation 40.0 14400 < th dose dependent rect. 20 9
998 63.83 atmosphere 1015.0 270 < th dose independent rect. 18 8