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Os06g0222400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0246) R2 : 0.644
β1 : 0.976 (0.0917) R2dD : 0.0978 R2D : 0.00244
β2 : 0.981 (0.0725) R2dC : 0.219 R2C : 0.392
β3 : -1.17 (0.114) R2dE : 0.14 R2E : 0.212
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.609 (0.055) R2dN8 : 0.145 R2N8 : 0.0205
σ : 0.453
deviance : 94.77
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C
peak time of C : 1.89
E
wheather : temperature
threshold : 21.7
memory length : 3
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.87 0.448 10.8 0.629 1.01 -1.05 0.0442 -2.1 0.51 1.91 20.2 8 -- --
93.11 0.449 10.8 0.992 0.999 -1.13 0.669 -- 0.61 1.83 21.57 3 -- --
90.84 0.447 10.8 0.619 1.01 -1.06 -- -2.15 0.507 1.93 20.2 7 -- --
94.77 0.453 10.8 0.976 0.981 -1.17 -- -- 0.609 1.89 21.7 3 -- --
130.75 0.533 10.8 0.95 -- -2.03 -- -1.55 0.711 -- 21.07 7 -- --
113.48 0.499 10.8 0.764 1.43 -- 0.914 -- 0.42 2.05 -- -- -- --
116.64 0.506 10.9 0.737 1.43 -- -- -- 0.415 2.08 -- -- -- --
132.69 0.536 10.8 1.19 -- -2.1 -- -- 0.781 -- 21.27 2 -- --
118.19 0.509 10.8 -- 1.12 -0.882 -- -- 0.454 1.96 21.9 4 -- --
239.31 0.723 10.8 0.796 -- -- -- -- 0.449 -- -- -- -- --
130.95 0.535 10.9 -- 1.44 -- -- -- 0.333 2.09 -- -- -- --
167.2 0.604 10.8 -- -- -1.9 -- -- 0.537 -- 24.02 2 -- --
256.04 0.747 10.9 -- -- -- -- -- 0.36 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.84 temperature 20 10 > th dose dependent rect. 6 21
3 89.03 temperature 30 90 < th dose dependent rect. 1 22
4 89.51 temperature 25 270 < th dose independent rect. 24 21
11 90.06 temperature 20 10 > th dose dependent rect. 9 18
28 90.66 temperature 30 10 < th dose dependent rect. 3 20
31 90.69 temperature 30 10 < th dose dependent rect. 1 23
34 90.82 temperature 20 30 > th dose dependent rect. 19 23
36 90.85 temperature 20 10 > th dose dependent rect. 23 23
43 91.04 temperature 20 10 > th dose dependent no NA NA
47 91.08 temperature 20 10 > th dose dependent rect. 9 23
48 91.09 temperature 30 90 < th dose dependent rect. 3 18
58 91.29 temperature 30 10 < th dose dependent rect. 3 17
66 91.48 temperature 20 10 > th dose dependent rect. 21 23
71 91.54 atmosphere 995 270 > th dose dependent rect. 1 20
80 91.68 temperature 20 10 > th dose dependent rect. 17 23
99 91.92 temperature 10 10 > th dose dependent no NA NA
103 91.94 temperature 10 270 > th dose dependent rect. 4 22
105 92.00 temperature 30 10 < th dose dependent sin 22 NA
110 92.02 temperature 20 10 > th dose dependent rect. 23 19
138 92.35 temperature 15 270 > th dose dependent rect. 17 22
141 92.39 temperature 10 10 > th dose dependent sin 22 NA
145 92.44 temperature 25 270 > th dose independent rect. 17 23
146 92.44 temperature 20 10 > th dose dependent sin 23 NA
153 92.51 temperature 30 10 < th dose dependent rect. 3 23
171 92.70 temperature 30 10 < th dose dependent rect. 11 23
177 92.76 temperature 30 10 < th dose dependent rect. 13 23
180 92.79 temperature 25 270 < th dose independent rect. 9 22
190 92.85 temperature 30 10 < th dose dependent rect. 15 23
191 92.86 temperature 30 10 < th dose dependent no NA NA
218 93.07 temperature 20 10 > th dose dependent rect. 13 23
237 93.22 temperature 20 10 > th dose dependent rect. 11 23
244 93.25 temperature 20 10 > th dose dependent rect. 1 23
258 93.30 temperature 30 10 < th dose dependent rect. 9 23
273 93.38 atmosphere 1010 10 < th dose dependent rect. 6 21
300 93.57 temperature 30 10 < th dose dependent rect. 17 23
308 93.59 temperature 30 10 < th dose dependent rect. 7 23
311 93.60 temperature 30 10 < th dose dependent rect. 21 23
312 93.61 temperature 25 270 > th dose independent rect. 9 23
333 93.70 temperature 20 10 > th dose dependent rect. 15 23
354 93.83 atmosphere 1015 270 < th dose dependent rect. 6 19
360 93.86 temperature 25 270 > th dose independent rect. 3 23
377 93.95 temperature 25 270 > th dose independent no NA NA
379 93.96 atmosphere 1000 10 > th dose dependent rect. 3 20
471 94.30 temperature 30 10 < th dose dependent rect. 19 23
472 94.32 temperature 25 90 > th dose independent rect. 23 19
480 94.34 temperature 25 270 > th dose independent rect. 23 23
496 94.40 temperature 25 270 < th dose independent no NA NA
651 94.95 temperature 20 10 > th dose dependent rect. 6 12
659 94.97 temperature 25 270 > th dose independent rect. 11 23
728 95.29 temperature 25 270 < th dose independent rect. 17 23
738 95.33 temperature 10 270 > th dose dependent rect. 9 15
766 95.43 temperature 25 270 < th dose independent rect. 15 23
813 95.55 atmosphere 995 10 > th dose dependent rect. 1 23
864 95.71 temperature 30 90 < th dose dependent rect. 11 10
897 95.82 temperature 30 270 < th dose dependent rect. 11 8
962 95.98 temperature 25 270 < th dose independent rect. 11 8
972 96.00 atmosphere 1015 270 < th dose dependent rect. 6 9