Os06g0215600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Oxo-phytodienoic acid reductase.
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Os06g0215600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Oxo-phytodienoic acid reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 529.53 | 1.08 | 4.14 | 1.57 | 2.36 | -3.11 | -0.966 | 5.38 | 0.439 | 23.4 | 25.96 | 997 | -- | -- |
| 535.91 | 1.08 | 4.27 | 0.524 | 2.31 | -2.54 | -0.659 | -- | 0.21 | 23.5 | 25.93 | 1010 | -- | -- |
| 533.32 | 1.08 | 4.15 | 1.56 | 2.39 | -3.15 | -- | 5.22 | 0.437 | 23.2 | 25.96 | 981 | -- | -- |
| 537.63 | 1.08 | 4.27 | 0.559 | 2.33 | -2.6 | -- | -- | 0.216 | 23.4 | 25.91 | 996 | -- | -- |
| 767.88 | 1.29 | 4.09 | 1.71 | -- | -2.61 | -- | 5.34 | 0.411 | -- | 26.61 | 1658 | -- | -- |
| 724.39 | 1.26 | 4.29 | -0.174 | 1.72 | -- | -1.33 | -- | 0.0899 | 23.8 | -- | -- | -- | -- |
| 731.95 | 1.27 | 4.28 | -0.119 | 1.72 | -- | -- | -- | 0.0969 | 23.7 | -- | -- | -- | -- |
| 769.51 | 1.29 | 4.22 | 0.566 | -- | -2.04 | -- | -- | 0.247 | -- | 26.03 | 1633 | -- | -- |
| 545.29 | 1.09 | 4.28 | -- | 2.32 | -2.51 | -- | -- | 0.146 | 23.4 | 25.98 | 985 | -- | -- |
| 918.45 | 1.42 | 4.24 | -0.0695 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 732.32 | 1.27 | 4.28 | -- | 1.72 | -- | -- | -- | 0.11 | 23.7 | -- | -- | -- | -- |
| 777.06 | 1.3 | 4.24 | -- | -- | -1.94 | -- | -- | 0.13 | -- | 26.5 | 1641 | -- | -- |
| 918.57 | 1.41 | 4.24 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 533.75 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 534.24 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 3 | 534.28 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 6 | 534.77 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 10 | 535.09 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 11 | 535.14 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 18 | 535.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 20 | 535.53 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 23 | 535.67 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 30 | 535.97 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 31 | 535.98 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 38 | 536.29 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 41 | 536.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 77 | 537.10 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 135 | 537.90 | temperature | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 150 | 538.03 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 162 | 538.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 173 | 538.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 174 | 538.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 186 | 538.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 19 |
| 198 | 538.43 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 13 |
| 203 | 538.46 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 208 | 538.49 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 230 | 538.59 | temperature | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 236 | 538.61 | temperature | 20 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 316 | 539.03 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 328 | 539.06 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 20 |
| 329 | 539.06 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 333 | 539.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 18 |
| 348 | 539.15 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 450 | 539.47 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 549 | 539.79 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 551 | 539.79 | temperature | 20 | 43200 | < th | dose dependent | sin | 10 | NA |
| 608 | 539.96 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 745 | 540.43 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 755 | 540.47 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 997 | 541.66 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |