BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0215600 Os06g0215600|AK061212
(374 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375 524 e-149
AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398 514 e-146
AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325 455 e-128
AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392 400 e-112
AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270 353 7e-98
AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270 353 7e-98
>AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375
Length = 374
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/372 (67%), Positives = 301/372 (80%), Gaps = 11/372 (2%)
Query: 1 MVNQAA---MPLLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGG 57
MVN A +PLLTPYK G+ +LSHRV+L+P+TR +SYG+VPQPHA LYY+QR + GG
Sbjct: 3 MVNAEAKQSVPLLTPYKM--GRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGG 60
Query: 58 LLITEATGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDY 117
LI EATGVSDTAQGYP+TPG+WT+EHVEAWKPIVDAVH KG +F CQ+WHVGRVS +
Sbjct: 61 FLIAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGF 120
Query: 118 QPNGQAPISSSDIQITPD--GSGI---VYSKPRRLRVDEIPQIVDDFRLAARNAIEAGFD 172
QP QAPIS + I P +GI ++ PRRL ++EIP IV+DFRLAARNA+EAGFD
Sbjct: 121 QPRRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFD 180
Query: 173 GVEIHGANGYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEVIDAVVGEIGAHRVGIRLSP 232
GVEIHGA+GYL++QFMKD NDRTDEYGGSL+NRC+FA+EV+DAV EIG RVGIRLSP
Sbjct: 181 GVEIHGAHGYLIDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSP 240
Query: 233 FLDFMDCVDSDPEALGSYMVEQLNKHEGFLYCHMVEPRMAIVDGRRQIQHGLLPFRKAFK 292
F D+M+ D++PEALG YMVE LNK+ G LYCHM+EPRM V H L+P R+AFK
Sbjct: 241 FADYMESGDTNPEALGLYMVESLNKY-GILYCHMIEPRMKTVGEIAACSHTLMPMREAFK 299
Query: 293 GTFIAAGGYDREEGNKVIENGYTDLVSFGRLFLANPDLPKRFELDAPLNKYDRNTFYTQD 352
GTFI+AGG+ RE+GN+ + G TDLV++GR FLANPDLPKRF+LDAPLNKY+R+TFYT D
Sbjct: 300 GTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSD 359
Query: 353 PIVGYTDYPFLD 364
P+VGYTDYP L+
Sbjct: 360 PVVGYTDYPSLE 371
>AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398
Length = 397
Score = 514 bits (1323), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 302/391 (77%), Gaps = 33/391 (8%)
Query: 4 QAAMPLLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLITEA 63
+ ++PLLTPYK G+ +LSHRV+L+P+TR RSYGNVPQPHAA+YY+QR T GG LITEA
Sbjct: 7 KQSVPLLTPYKM--GRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEA 64
Query: 64 TGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQPNGQA 123
TGVSDTAQGY +TPG+WT+EHVEAWKPIVDAVH KG +F CQ+WHVGRVS + +QPNG+A
Sbjct: 65 TGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKA 124
Query: 124 PISSSDIQITPD--GSGI---VYSKPRRLRVDEIPQIVDDFRLAARNAIE---------- 168
PIS SD + P +GI +++ PRRL ++EIP IV+DFRLAARNA+E
Sbjct: 125 PISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGKHILDLEF 184
Query: 169 ---------------AGFDGVEIHGANGYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEV 213
AGFDGVEIHGANGYL++QFMKD+ NDRTDEYGGSL+NRC+F +E+
Sbjct: 185 KKLKPFKILICVLVVAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEI 244
Query: 214 IDAVVGEIGAHRVGIRLSPFLDFMDCVDSDPEALGSYMVEQLNKHEGFLYCHMVEPRMAI 273
+DAV EIG RVGIRLSPF D+M+ D++P ALG YM E LNK+ G LYCH++E RM
Sbjct: 245 VDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKY-GILYCHVIEARMKT 303
Query: 274 VDGRRQIQHGLLPFRKAFKGTFIAAGGYDREEGNKVIENGYTDLVSFGRLFLANPDLPKR 333
+ H L+P RKAFKGTFI+AGG+ RE+GN+ + G TDLV++GR FLANPDLPKR
Sbjct: 304 MGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKR 363
Query: 334 FELDAPLNKYDRNTFYTQDPIVGYTDYPFLD 364
F++DAPLNKYDR TFYT DP+VGYTDYPFL+
Sbjct: 364 FQVDAPLNKYDRPTFYTSDPVVGYTDYPFLE 394
>AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325
Length = 324
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 212/323 (65%), Positives = 253/323 (78%), Gaps = 2/323 (0%)
Query: 20 IDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLITEATGVSDTAQGYPETPGV 79
+L+HR++++PM R RSYGN+PQPH ALYY QR T GGLLI+EATGVS+TA Y PG+
Sbjct: 4 FNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNMPGI 63
Query: 80 WTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQPNGQAPISSSDIQITPDGSGI 139
W +E +EAWKPIVDAVH G +F CQLWH GRVS D QPNG++P+SS+D D S
Sbjct: 64 WRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFADDPSN- 122
Query: 140 VYSKPRRLRVDEIPQIVDDFRLAARNAIEAGFDGVEIHGANGYLLEQFMKDSSNDRTDEY 199
++ PRRLR DEIP I++DFRLAARNA EAGFDGVEIHGA+GYL++QFMKDS NDRTD Y
Sbjct: 123 EFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRTDSY 182
Query: 200 GGSLENRCRFAVEVIDAVVGEIGAHRVGIRLSPFLDFMDCVDSDPEALGSYMVEQLNKHE 259
GGSLENRCRFA++VI+AV EIG RVGIRLSPF D+M+ D+DP+ LG YM + LN+ E
Sbjct: 183 GGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLNRFE 242
Query: 260 GFLYCHMVEPRMAIVDGRRQIQHGLLPFRKAFKGTFIAAGGYDREEGNKVIENGYTDLVS 319
LYCHM+EPRM V + + L P R AF GTFI AGGY RE+GNK + G TDLV+
Sbjct: 243 -ILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVA 301
Query: 320 FGRLFLANPDLPKRFELDAPLNK 342
+GRLFLANPDLPKRFEL+APLNK
Sbjct: 302 YGRLFLANPDLPKRFELNAPLNK 324
>AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392
Length = 391
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/376 (51%), Positives = 255/376 (67%), Gaps = 23/376 (6%)
Query: 9 LLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLITEATGVSD 68
L + YK G+ DLSHRV+L+PMTRCR+ VP A YY QR T GG LI+E T VS
Sbjct: 12 LFSSYKM--GRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSP 69
Query: 69 TAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQPNGQAPISSS 128
+ G+P PG+++ E VEAWK +V+AVH KG CQLWHVGR S YQPNG +PISS+
Sbjct: 70 GSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISST 129
Query: 129 DIQIT--------PDGSGIVYSKPRRLRVDEIPQIVDDFRLAARNAIEAGFDGVEIHGAN 180
+ I+ PDGS + Y KPR L EIP++V+D+ L+A NAI AGFDG+EIHGA+
Sbjct: 130 NKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAH 189
Query: 181 GYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEVIDAVVGEIGAHRVGIRLSPFLDFMDCV 240
GYL++QF+KD NDRTD+YGGS+ NRCRF +V++ VV IGA +VG+R+SP +D +D
Sbjct: 190 GYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDAT 249
Query: 241 DSDPEALGSYMVEQLNKHEG-----FLYCHMVEPRMAIVDGRRQIQHG--------LLPF 287
DSDP +LG +V LNK +G Y H+ +PR + G +
Sbjct: 250 DSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSL 309
Query: 288 RKAFKGTFIAAGGYDREEGNKVIENGYTDLVSFGRLFLANPDLPKRFELDAPLNKYDRNT 347
R A+ GTF+++GG+++E G + ++ G DLVS+GRLF+ANPDL RF++D LNKY+R T
Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369
Query: 348 FYTQDPIVGYTDYPFL 363
FYTQDP+VGYTDYPFL
Sbjct: 370 FYTQDPVVGYTDYPFL 385
>AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270
Length = 269
Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 167/259 (64%), Positives = 210/259 (81%), Gaps = 4/259 (1%)
Query: 1 MVNQAAMPLLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLI 60
M + ++PLL PYK G +LSHRV+L+P+TR RSYGN+PQP+A LYYTQR T GGLLI
Sbjct: 1 METKQSIPLLMPYKM--GPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLI 58
Query: 61 TEATGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQPN 120
+E+ VS+T+ GYP+ PG+W R+ VEAWKPIVDAVH KG +F CQ+WH GRV D QPN
Sbjct: 59 SESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPN 117
Query: 121 GQAPISSSDIQI-TPDGSGIVYSKPRRLRVDEIPQIVDDFRLAARNAIEAGFDGVEIHGA 179
G+AP+SS+D + + G + PRRLR DE+P IV+DFR+AARNAIEAGFDGVE+HGA
Sbjct: 118 GEAPVSSTDKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGA 177
Query: 180 NGYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEVIDAVVGEIGAHRVGIRLSPFLDFMDC 239
+GYL++QF+KD NDR+D+YGGSLENRCRFA+EVI+AVV EIG+ RVGIRLSPF D+M+
Sbjct: 178 HGYLIDQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMES 237
Query: 240 VDSDPEALGSYMVEQLNKH 258
DS+PEALG Y+V+ +NKH
Sbjct: 238 GDSNPEALGLYLVQAMNKH 256
>AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270
Length = 269
Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 167/259 (64%), Positives = 210/259 (81%), Gaps = 4/259 (1%)
Query: 1 MVNQAAMPLLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLI 60
M + ++PLL PYK G +LSHRV+L+P+TR RSYGN+PQP+A LYYTQR T GGLLI
Sbjct: 1 METKQSIPLLMPYKM--GPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLI 58
Query: 61 TEATGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQPN 120
+E+ VS+T+ GYP+ PG+W R+ VEAWKPIVDAVH KG +F CQ+WH GRV D QPN
Sbjct: 59 SESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPN 117
Query: 121 GQAPISSSDIQI-TPDGSGIVYSKPRRLRVDEIPQIVDDFRLAARNAIEAGFDGVEIHGA 179
G+AP+SS+D + + G + PRRLR DE+P IV+DFR+AARNAIEAGFDGVE+HGA
Sbjct: 118 GEAPVSSTDKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGA 177
Query: 180 NGYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEVIDAVVGEIGAHRVGIRLSPFLDFMDC 239
+GYL++QF+KD NDR+D+YGGSLENRCRFA+EVI+AVV EIG+ RVGIRLSPF D+M+
Sbjct: 178 HGYLIDQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMES 237
Query: 240 VDSDPEALGSYMVEQLNKH 258
DS+PEALG Y+V+ +NKH
Sbjct: 238 GDSNPEALGLYLVQAMNKH 256
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,903,258
Number of extensions: 400729
Number of successful extensions: 763
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 748
Number of HSP's successfully gapped: 6
Length of query: 374
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,364,969
Effective search space: 2292001506
Effective search space used: 2292001506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)