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Os06g0210100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : emp24/gp25L/p24 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0146) R2 : 0.106
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.227 (0.0308) R2dN8 : 0.137 R2N8 : 0.106
σ : 0.275
deviance : 34.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.74 0.219 12 -0.254 0.18 -0.599 0.157 1.12 0.0837 1.28 23.14 843 -- --
22.05 0.219 11.9 -0.203 0.216 -0.861 -0.00121 -- 0.118 0.375 19.97 2359 -- --
21.81 0.218 12 -0.251 0.184 -0.606 -- 1.07 0.0846 1.46 23.09 779 -- --
21.96 0.218 11.9 -0.235 0.196 -0.926 -- -- 0.104 0.719 20.07 2332 -- --
23.66 0.227 11.9 -0.255 -- -0.715 -- 0.941 0.0791 -- 23.1 952 -- --
30.76 0.26 11.9 0.092 0.243 -- -0.0979 -- 0.233 0.734 -- -- -- --
30.8 0.26 11.9 0.0956 0.243 -- -- -- 0.234 0.741 -- -- -- --
24.32 0.23 11.9 -0.255 -- -0.963 -- -- 0.096 -- 20.22 2368 -- --
23.12 0.224 11.9 -- 0.216 -0.883 -- -- 0.124 0.787 19.89 2161 -- --
34.49 0.274 11.9 0.104 -- -- -- -- 0.238 -- -- -- -- --
31.04 0.261 11.9 -- 0.244 -- -- -- 0.223 0.759 -- -- -- --
25.57 0.236 11.9 -- -- -0.826 -- -- 0.145 -- 19.95 2333 -- --
34.78 0.275 11.9 -- -- -- -- -- 0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.39 humidity 90 14400 > th dose dependent rect. 2 9
2 20.42 humidity 90 14400 > th dose dependent rect. 3 7
5 20.45 humidity 90 14400 > th dose dependent rect. 1 13
20 20.57 humidity 90 14400 > th dose dependent sin 6 NA
53 20.76 humidity 90 14400 > th dose dependent rect. 18 16
116 20.97 humidity 90 14400 > th dose dependent rect. 12 18
183 21.11 humidity 90 14400 > th dose dependent rect. 17 11
215 21.19 humidity 90 14400 > th dose dependent no NA NA
252 21.49 radiation 30 4320 < th dose independent rect. 16 16
259 21.55 temperature 25 1440 < th dose dependent rect. 8 1
271 21.65 humidity 90 14400 > th dose independent rect. 23 12
275 21.68 temperature 25 1440 < th dose dependent rect. 7 3
276 21.69 humidity 50 43200 > th dose independent rect. 8 1
278 21.70 humidity 90 14400 > th dose independent rect. 1 9
282 21.71 temperature 20 1440 < th dose independent rect. 5 2
285 21.72 humidity 90 14400 > th dose independent sin 8 NA
286 21.72 humidity 50 43200 < th dose independent rect. 8 1
301 21.77 humidity 60 43200 < th dose dependent rect. 7 2
329 21.85 temperature 25 1440 < th dose dependent rect. 4 7
332 21.86 temperature 20 1440 > th dose independent rect. 5 2
337 21.87 temperature 20 1440 < th dose dependent rect. 4 1
353 21.91 humidity 90 14400 > th dose independent rect. 18 10
378 21.96 temperature 25 1440 < th dose dependent rect. 20 15
414 22.02 radiation 1 14400 < th dose dependent rect. 7 1
426 22.04 radiation 30 4320 < th dose independent rect. 2 6
428 22.04 radiation 30 4320 < th dose independent rect. 18 14
435 22.05 radiation 30 4320 < th dose independent rect. 5 3
438 22.05 radiation 30 4320 < th dose independent rect. 22 10
442 22.05 temperature 25 1440 < th dose dependent sin 7 NA
453 22.06 temperature 20 1440 < th dose independent rect. 21 16
487 22.10 humidity 50 43200 > th dose independent rect. 20 13
495 22.11 temperature 20 1440 > th dose independent rect. 21 16
510 22.13 radiation 1 14400 < th dose independent rect. 7 1
515 22.13 humidity 60 43200 < th dose dependent rect. 20 13
527 22.14 temperature 25 720 < th dose dependent rect. 14 22
531 22.15 humidity 50 43200 < th dose independent rect. 20 13
540 22.15 temperature 25 720 < th dose dependent rect. 16 23
542 22.16 temperature 20 1440 < th dose independent sin 6 NA
543 22.16 radiation 1 14400 > th dose independent rect. 7 1
548 22.16 temperature 20 720 > th dose independent rect. 19 20
555 22.17 temperature 20 1440 < th dose independent rect. 1 12
568 22.18 temperature 25 720 < th dose dependent no NA NA
577 22.18 temperature 10 720 > th dose dependent rect. 19 20
580 22.18 temperature 25 720 < th dose dependent rect. 3 23
598 22.19 temperature 25 720 < th dose dependent rect. 21 23
603 22.20 temperature 20 1440 < th dose independent rect. 3 7
615 22.20 temperature 25 720 < th dose dependent rect. 6 23
634 22.22 temperature 20 1440 > th dose independent sin 6 NA
635 22.22 temperature 20 4320 > th dose independent rect. 18 5
649 22.22 temperature 25 720 < th dose dependent rect. 19 23
659 22.23 temperature 25 1440 < th dose dependent rect. 21 1
668 22.24 temperature 20 4320 < th dose independent rect. 18 5
688 22.24 temperature 30 90 < th dose dependent rect. 21 23
689 22.25 temperature 20 1440 > th dose independent rect. 1 12
734 22.27 temperature 20 1440 > th dose independent rect. 3 8
749 22.28 wind 1 43200 > th dose independent rect. 2 1
847 22.32 humidity 80 43200 < th dose independent rect. 6 1
897 22.34 humidity 80 43200 > th dose independent rect. 6 1
908 22.34 temperature 20 720 > th dose independent rect. 9 22
911 22.34 humidity 80 43200 < th dose dependent rect. 6 1
946 22.35 temperature 15 270 > th dose dependent rect. 16 23