Os06g0203200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Flavin-containing monooxygenase FMO family protein.
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Os06g0203200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Flavin-containing monooxygenase FMO family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.57 | 0.85 | 6.07 | -3.85 | 2.1 | 3.44 | 1.49 | -4.52 | -0.942 | 11.1 | 13.9 | 7336 | -- | -- |
| 343.46 | 0.863 | 5.92 | -2.98 | 2.25 | 3.81 | 1.45 | -- | -0.776 | 11.1 | 0.9523 | 9511 | -- | -- |
| 335.73 | 0.853 | 6.09 | -3.89 | 2.19 | 3.49 | -- | -4.63 | -1.04 | 11.1 | 14.13 | 8150 | -- | -- |
| 349.93 | 0.871 | 5.91 | -2.91 | 2.11 | 3.91 | -- | -- | -0.783 | 11.2 | 3.315 | 8646 | -- | -- |
| 534.36 | 1.08 | 5.92 | -2.38 | -- | 4.53 | -- | -4.79 | -0.436 | -- | 15.13 | 7384 | -- | -- |
| 593.59 | 1.14 | 5.65 | -0.88 | 2.04 | -- | 1.37 | -- | 0.373 | 10.9 | -- | -- | -- | -- |
| 601.49 | 1.15 | 5.65 | -0.824 | 2.03 | -- | -- | -- | 0.378 | 11 | -- | -- | -- | -- |
| 554.82 | 1.1 | 5.84 | -1.7 | -- | 4.58 | -- | -- | -0.247 | -- | 3.315 | 8646 | -- | -- |
| 487.2 | 1.03 | 5.73 | -- | 1.58 | 3.53 | -- | -- | 0.0513 | 9.12 | 12.13 | 2218 | -- | -- |
| 857.73 | 1.37 | 5.7 | -0.869 | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
| 619.38 | 1.16 | 5.63 | -- | 2.04 | -- | -- | -- | 0.47 | 11 | -- | -- | -- | -- |
| 626.92 | 1.17 | 5.78 | -- | -- | 4.05 | -- | -- | 0.0019 | -- | 3.315 | 8646 | -- | -- |
| 877.65 | 1.38 | 5.68 | -- | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 14 |
| 3 | 322.94 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 5 | 323.28 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 6 | 323.32 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 14 | 323.76 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 25 | 324.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 28 | 324.43 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 34 | 324.53 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 36 | 324.56 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 43 | 324.74 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 60 | 325.09 | wind | 5 | 43200 | > th | dose independent | sin | 0 | NA |
| 64 | 325.16 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 65 | 325.17 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 80 | 325.63 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 98 | 325.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 115 | 325.98 | wind | 5 | 43200 | < th | dose independent | sin | 0 | NA |
| 125 | 326.17 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 137 | 326.31 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 146 | 326.43 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 165 | 326.66 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 170 | 326.69 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 191 | 326.89 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 192 | 326.92 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 199 | 327.00 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 204 | 327.03 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 206 | 327.04 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 212 | 327.13 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 228 | 327.25 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 235 | 327.35 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 247 | 327.45 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 268 | 327.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 21 |
| 289 | 327.89 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 294 | 327.92 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 295 | 327.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 492 | 329.51 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 537 | 329.82 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 545 | 329.86 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 568 | 330.03 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 584 | 330.17 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 688 | 330.75 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 694 | 330.78 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 708 | 330.83 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 713 | 330.85 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 760 | 331.11 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 815 | 331.46 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 826 | 331.55 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 843 | 331.70 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 856 | 331.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 863 | 331.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 877 | 331.95 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 886 | 332.00 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 901 | 332.09 | temperature | 30 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 925 | 332.26 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 929 | 332.27 | temperature | 30 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 942 | 332.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 947 | 332.39 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 948 | 332.39 | temperature | 30 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 964 | 332.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 1 |