BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0203200 Os06g0203200|AK106056
(517 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19250.1 | chr1:6650656-6653053 REVERSE LENGTH=531 293 1e-79
AT5G45180.1 | chr5:18274179-18276586 REVERSE LENGTH=460 259 2e-69
AT1G65860.1 | chr1:24499210-24502678 REVERSE LENGTH=460 61 1e-09
AT4G28720.1 | chr4:14192688-14193968 FORWARD LENGTH=427 61 2e-09
AT5G61290.1 | chr5:24648599-24650647 FORWARD LENGTH=462 61 2e-09
AT5G43890.1 | chr5:17648857-17650131 REVERSE LENGTH=425 60 3e-09
AT5G07800.1 | chr5:2486717-2489241 REVERSE LENGTH=461 59 4e-09
AT1G12160.1 | chr1:4126068-4128090 FORWARD LENGTH=469 58 1e-08
AT1G62620.1 | chr1:23182678-23184864 FORWARD LENGTH=451 57 2e-08
AT1G62560.1 | chr1:23159912-23162551 FORWARD LENGTH=463 56 5e-08
AT2G33230.1 | chr2:14080411-14081971 REVERSE LENGTH=432 56 5e-08
AT1G63370.1 | chr1:23503205-23505358 REVERSE LENGTH=451 55 6e-08
AT5G25620.2 | chr5:8935312-8938200 REVERSE LENGTH=427 53 3e-07
AT1G62580.1 | chr1:23173333-23176931 FORWARD LENGTH=498 52 6e-07
AT1G12200.1 | chr1:4137627-4139835 FORWARD LENGTH=466 51 2e-06
>AT1G19250.1 | chr1:6650656-6653053 REVERSE LENGTH=531
Length = 530
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 262/512 (51%), Gaps = 21/512 (4%)
Query: 4 TKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRR-TLASTRLQTPAFAYR 62
T RVAI+GAG SGL A K+ + P VFEA+ D VGGVWR T +T+LQ+ Y
Sbjct: 9 TSSRVAIIGAGVSGLAAAKNLVHHN--PTVFEAS-DSVGGVWRSCTYETTKLQSARVDYE 65
Query: 63 FSDFPWPADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAA 122
FSDFPWP + FP + ++++YL +YA+ + + ++FG KV+ + G D E
Sbjct: 66 FSDFPWPNNRDDT-TFPPYLEILDYLESYAKHFDLLKFMKFGSKVIEVRFIG--DGETPQ 122
Query: 123 WERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLILCTGRFSGVAHTPTFPPNRGP 182
G G W + VQ S Q H +F+++CTG++ V P FP +GP
Sbjct: 123 MVDLGAYGNLL-PGKPVWEVAVQIGDSGDIQWHAFEFVVVCTGKYGDVPRIPAFPAKKGP 181
Query: 183 EVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDTVAECAAANGGR--YPCAM 240
E+F G+V+HSMDY + A L+ GK+VAV+G KSA D E A AN G C M
Sbjct: 182 EMFQGKVMHSMDYCKLEKEEASTLLSGKKVAVIGFKKSAIDLALESALANQGEGGKACTM 241
Query: 241 ICRSGRWMVNGGFVWGVSLGHLFCNRLAELTVHKPGEGXXXXXXXXXXXXXXXXXSKLAE 300
+ R+ W + +VWG+ + +R ++ +P + SK E
Sbjct: 242 VVRTTHWGIPHYWVWGLPFFLFYSSRASQFLHDRPNQSFLRTLFCLLFSLLRAVVSKFIE 301
Query: 301 TYFKMQIPMEKHGMVPEESFAGSMSGCRLGVLPDKFYDRVEEGSILIKRARSFSFCXXXX 360
+Y ++P+EK+G+ P SF + C++ ++P+ F++ ++G I K++ + F
Sbjct: 302 SYVLWKLPLEKYGLKPNHSFEEDYASCQMAIIPENFFEEADKGMIRFKKSSKWWFYEEGI 361
Query: 361 XXXXXXXXERVDADVVVLATGFRGDQKLTDMFVSATFKQQIV----AAPLYRQCVHPRIP 416
E ADVV+LATG+ G +KL + V F+ + PLYR +HP IP
Sbjct: 362 VFEDGTTLE---ADVVILATGYDGKKKLKAI-VPEPFRTWLEFPSGVMPLYRGTIHPLIP 417
Query: 417 QMAVIGYTENLTSIYTFEMMAKWVAHLLAGAFRLPSVVRMEASAAEWDEHLAMRRHXXXX 476
M +GY ++ ++++T E+ + W++ L+ FRLPS +M ++ + + + R+
Sbjct: 418 NMGFVGYVQSSSNLHTSELRSMWLSRLVDEKFRLPSKEKM---LDQFLKEMEVTRNSSRF 474
Query: 477 XXXXXXXXVSTWYNDEMCRDMGYEPRRKKGIL 508
S + D+MC DMG P RK L
Sbjct: 475 YKRHCISTFSIQHADDMCNDMGLNPWRKSNFL 506
>AT5G45180.1 | chr5:18274179-18276586 REVERSE LENGTH=460
Length = 459
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 260/508 (51%), Gaps = 67/508 (13%)
Query: 4 TKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRR-TLASTRLQTPAFAYR 62
T RVAI+GAG SGL A KH LA+ P VFEA+ D +GGVWR+ T +T+LQ+ +Y
Sbjct: 9 TSSRVAIIGAGVSGLAAAKH-LAR-HHPQVFEAS-DSIGGVWRKCTYETTKLQSVRVSYE 65
Query: 63 FSDFPWPADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAA 122
SDF WP G FP + V++YL AYA+ + + ++F KV+ + G D +
Sbjct: 66 LSDFLWPN--RGESSFPTYVDVLDYLEAYAKHFNLVKFIKFNSKVVELRFIG--DGKTLQ 121
Query: 123 WERWSGNGEAFGD---GSGEWLLTVQHPGSEATQIHRVDFLILCTGRFSGVAHTPTFPPN 179
G+ A+G+ G W + V + G Q H +++++C G++ V TPTFP
Sbjct: 122 ----MGDLGAYGNLLPGKPVWEVAV-NTGDGDIQWHAFEYVVVCAGKYGDVPRTPTFPVK 176
Query: 180 RGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDTVAECAAANGGR--YP 237
+GPE+F G+VLHSMDYS + A +L+ GK+VAV+G KSA D E A AN G+
Sbjct: 177 KGPEIFKGKVLHSMDYSKLQKEKASQLLHGKKVAVIGFKKSAIDLALESALANQGKEGKT 236
Query: 238 CAMICRSGRWMVNGGFVWGVSLGHLFCNRLAELTVHKPGEGXXXXXXXXXXXXXXXXXSK 297
C M+ R+ W++ W ++ SK
Sbjct: 237 CTMVVRTPHWVI--PHYWRATV------------------------------------SK 258
Query: 298 LAETYFKMQIPMEKHGMVPEESFAGSMSGCRLGVLPDKFYDRVEEGSILIKRARSFSFCX 357
E+Y ++P+EK+G+ P+ +F + C++ ++P+KF++ ++G I KR ++ F
Sbjct: 259 FIESYVLWKLPLEKYGLKPDHAFEEDYASCQMALVPEKFFEEADKGMIRFKRTTNWWFYD 318
Query: 358 XXXXXXXXXXXERVDADVVVLATGFRGDQKLTDMFVSATFKQQIV----AAPLYRQCVHP 413
E ADVV+LATG+ G +KL + V F+ + PLYR +HP
Sbjct: 319 EGIEFEDGTTLE---ADVVILATGYDGMKKLKAI-VPEPFRSWLEFPWGIMPLYRGTIHP 374
Query: 414 RIPQMAVIGYTENLTSIYTFEMMAKWVAHLLAGAFRLPSVVRMEASAAEWDEHLAMRRHX 473
IP M IGY ++ +++ + E+ ++W++ LL G F LPS +M ++ + + + R
Sbjct: 375 LIPNMGFIGYVQSSSNLKSSELHSRWLSQLLDGKFTLPSKEKM---LDQFLKEMHVMRRS 431
Query: 474 XXXXXXXXXXXVSTWYNDEMCRDMGYEP 501
S + D++ +DM +P
Sbjct: 432 SRFFKNHCFSTFSIQHADDLSKDMNLKP 459
>AT1G65860.1 | chr1:24499210-24502678 REVERSE LENGTH=460
Length = 459
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 66/252 (26%)
Query: 6 KRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWR---------------RTLA 50
K VA++GAGA+GL + +G VVF+ VGG+W RT+
Sbjct: 11 KHVAVIGAGAAGLVTARELRREGHTVVVFDREKQ-VGGLWNYSSKADSDPLSLDTTRTIV 69
Query: 51 ST------RLQTPAFAYRFSDFPWPA---DVS-GAEVFPRHDQVVEYLAAYARRHGVTEC 100
T R P F+DFP+ D+S + +P H +V+ YL +AR + E
Sbjct: 70 HTSIYESLRTNLPRECMGFTDFPFVPRIHDISRDSRRYPSHREVLAYLQDFAREFKIEEM 129
Query: 101 VRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRV-DF 159
VRF +V+ E +G+W +V+ S H + D
Sbjct: 130 VRFETEVVCVEPV-----------------------NGKW--SVRSKNSVGFAAHEIFDA 164
Query: 160 LILCTGRFS--GVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGS 217
+++C+G F+ VAH P G + + G+ +HS +Y G + V V+G+
Sbjct: 165 VVVCSGHFTEPNVAHIP------GIKSWPGKQIHSHNYRVPG------PFNNEVVVVIGN 212
Query: 218 GKSAFDTVAECA 229
S D + A
Sbjct: 213 YASGADISRDIA 224
>AT4G28720.1 | chr4:14192688-14193968 FORWARD LENGTH=427
Length = 426
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 9 AIVGAGASGLT--ACKHALAKGFRPVVFEAAGDGVGGVW-RRTLASTRLQTPAFAYRFSD 65
IVGAG SGL AC H F VV E A D + +W +RT +L P +
Sbjct: 26 VIVGAGPSGLATAACLHEQNVPF--VVLERA-DCIASLWQKRTYDRLKLHLPKQFCQLPK 82
Query: 66 FPWPADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAAWER 125
P+P D +P Q ++YL +YA R + +F V A + DE + W
Sbjct: 83 MPFPEDFPE---YPTKRQFIDYLESYATRFEINP--KFNECVQTARF----DETSGLWR- 132
Query: 126 WSGNGEAFGDGSGEWLLTVQHPGSEATQIHRV-DFLILCTGRFSGVAHTPTFPPNRGPEV 184
+ TV S T++ + +L++ TG + P G
Sbjct: 133 ---------------VKTVSKSESTQTEVEYICRWLVVATGENA----ERVMPEIDGLSE 173
Query: 185 FHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDTVAECA 229
F G+V+H+ DY + E GK+V VVG G S + + A
Sbjct: 174 FSGEVIHACDYK------SGEKFAGKKVLVVGCGNSGMEVSLDLA 212
>AT5G61290.1 | chr5:24648599-24650647 FORWARD LENGTH=462
Length = 461
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 50/252 (19%)
Query: 1 MDATKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVW--------------R 46
+ + K V ++GAG SGL + + +G + VV E D VGG W
Sbjct: 9 IKSQSKTVCVIGAGPSGLVSARELKKEGHKVVVMEQNHD-VGGQWLYQPNVDEEDTLGKT 67
Query: 47 RTL-------ASTRLQTPAFAYRFSDFPWPA-DVSGAEVFPRHDQVVEYLAAYARRHGVT 98
+TL +S RL +P FSDFP+ A + + FP H++++ YL + + G+
Sbjct: 68 KTLKVHSSVYSSLRLASPREVMGFSDFPFIAKEGRDSRRFPGHEELLLYLKDFCQVFGLR 127
Query: 99 ECVRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLL-TVQHPGSEATQIHRV 157
E +RF +V E+ G+ +E+ D +W++ +V+ G ++
Sbjct: 128 EMIRFNVRV---EFVGMVNEDDDD-----------DDDVKKWMVKSVKKSGEVMEEV--F 171
Query: 158 DFLILCTGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGS 217
D +++ +G +S P P +G +++ + LHS Y + DE+ V VVG
Sbjct: 172 DAVVVASGHYS----YPRLPTIKGMDLWKRKQLHSHIY-RVPEPFCDEV-----VVVVGC 221
Query: 218 GKSAFDTVAECA 229
S D E
Sbjct: 222 SMSGQDISIELV 233
>AT5G43890.1 | chr5:17648857-17650131 REVERSE LENGTH=425
Length = 424
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 95/237 (40%), Gaps = 41/237 (17%)
Query: 10 IVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVW-RRTLASTRLQTPAFAYRFSDFPW 68
IVGAG SGL +G VV E A D + +W +RT +L P + P+
Sbjct: 27 IVGAGPSGLATAACLREEGVPFVVLERA-DCIASLWQKRTYDRIKLHLPKKVCQLPKMPF 85
Query: 69 PADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAAWERWSG 128
P D +P Q +EYL +YA + +T +F V +A Y DE + W
Sbjct: 86 PEDYPE---YPTKRQFIEYLESYANKFEITP--QFNECVQSARY----DETSGLWR---- 132
Query: 129 NGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLILCTGRFSGVAHTPTFPPNRGPEV-FHG 187
+ T S + + +L++ TG + P G F G
Sbjct: 133 ------------IKTTSSSSSGSEMEYICRWLVVATGENA----EKVVPEIDGLTTEFEG 176
Query: 188 QVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDTVAECAAANGGRYPCAMICRS 244
+V+HS +Y + E RGK V VVG G S + + A N +M+ RS
Sbjct: 177 EVIHSCEYK------SGEKYRGKSVLVVGCGNSGMEVSLDLANHNAN---ASMVVRS 224
>AT5G07800.1 | chr5:2486717-2489241 REVERSE LENGTH=461
Length = 460
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 58/252 (23%)
Query: 6 KRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVW-------------------- 45
K+V ++GAG +GL + + +G + VV E D VGG W
Sbjct: 14 KKVCVIGAGPAGLVSARELRKEGHKVVVLEQNED-VGGQWFYQPNVEEEDPLGRSSGSIN 72
Query: 46 ------RRTLASTRLQTPAFAYRFSDFPWPADVSGAEV--FPRHDQVVEYLAAYARRHGV 97
+S RL +P +SDFP+ A G ++ FP H ++ YL ++ G+
Sbjct: 73 GELKVHSSIYSSLRLTSPREIMGYSDFPFLAK-KGRDMRRFPGHKELWLYLKDFSEAFGL 131
Query: 98 TECVRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRV 157
E +RF +V E+ G +EE D +W++ + S
Sbjct: 132 REMIRFNVRV---EFVGEKEEE---------------DDVKKWIVRSREKFSGKVMEEIF 173
Query: 158 DFLILCTGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGS 217
D +++ TG +S P P +G + + + +HS Y + R + V VVG+
Sbjct: 174 DAVVVATGHYS----HPRLPSIKGMDSWKRKQIHSHVYR------VPDPFRNEVVVVVGN 223
Query: 218 GKSAFDTVAECA 229
S D E
Sbjct: 224 SMSGQDISMELV 235
>AT1G12160.1 | chr1:4126068-4128090 FORWARD LENGTH=469
Length = 468
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 59/250 (23%)
Query: 6 KRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVW---------------RRTLA 50
+ VA++G GA+GL A + +G + FE VGG+W RT+
Sbjct: 10 RHVAVIGLGAAGLVAVRELRREGHTVIGFEREKH-VGGLWVYTDRVDSDSVSVDPDRTIV 68
Query: 51 ------STRLQTPAFAYRFSDFPWPADVSGAEV--FPRHDQVVEYLAAYARRHGVTECVR 102
S R P +SDFP+ S + +P H +V+ YL +A+ + + +R
Sbjct: 69 HSSIYQSLRTNLPRECMGYSDFPFVTRSSDGDPRRYPDHREVLMYLQDFAKEFKIEDMIR 128
Query: 103 FGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLIL 162
F +VL E P E +W ++ SGE + D +++
Sbjct: 129 FETEVLCVE----PSPENN--RKWRVQFKSSNGVSGEEIF---------------DAVVV 167
Query: 163 CTGRFSG--VAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKS 220
C G F+ +AH P G E + G+ +HS +Y + DE+ V V+GS S
Sbjct: 168 CNGHFTEPRLAHIP------GIESWPGKQIHSHNY-RIPDPFKDEV-----VIVIGSQAS 215
Query: 221 AFDTVAECAA 230
D + A
Sbjct: 216 GNDISTDIAT 225
>AT1G62620.1 | chr1:23182678-23184864 FORWARD LENGTH=451
Length = 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 54/246 (21%)
Query: 8 VAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRRT---------LASTRLQTPA 58
VA++GAG +GL A + +G VVFE VGG W T + TR +
Sbjct: 13 VAVIGAGPAGLVAARELRREGHSVVVFEKQKQ-VGGTWIYTDEVESDPLSVDPTRSVVHS 71
Query: 59 FAYR------------FSDFPW--PADVS-GAEVFPRHDQVVEYLAAYARRHGVTECVRF 103
YR + DFP+ + VS FP H +V+ YL +A+ G+ E VRF
Sbjct: 72 SVYRSLRINGTRECTGYRDFPFVVRSGVSRDPRRFPSHGEVLAYLKDFAKEFGIEEMVRF 131
Query: 104 GCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLILC 163
+V+ A +G G+W + + + D +++C
Sbjct: 132 ETEVVKVSPAA-------------------EEGIGKWRIESTEKEKKVRRDEIYDAVVVC 172
Query: 164 TGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFD 223
G + P G + G+ +HS +Y E R K V ++G+ SA D
Sbjct: 173 NGHYV----EPRLAQIPGISSWPGKEMHSHNYR------IPEPFRDKVVVLIGNSSSAED 222
Query: 224 TVAECA 229
+ A
Sbjct: 223 ISRDIA 228
>AT1G62560.1 | chr1:23159912-23162551 FORWARD LENGTH=463
Length = 462
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 63/253 (24%)
Query: 4 TKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRRT--------------- 48
T K VA++GAG +GL + +G VVFE VGG+W T
Sbjct: 9 TSKHVAVIGAGPAGLITSRELRREGHSVVVFEREKQ-VGGLWVYTPKSDSDPLSLDPTRS 67
Query: 49 ------LASTRLQTPAFAYRFSDFP----WPADVSGAEVFPRHDQVVEYLAAYARRHGVT 98
S R P + DFP + + A +P H +V+ Y+ +AR +
Sbjct: 68 KVHSSIYESLRTNVPRESMGVRDFPFLPRFDDESRDARRYPNHREVLAYIQDFAREFKIE 127
Query: 99 ECVRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRVD 158
E +RF +V+ E +GN SG +L +I+ D
Sbjct: 128 EMIRFETEVVRVEPVD------------NGNWRVQSKNSGGFL---------EDEIY--D 164
Query: 159 FLILCTGRFS--GVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVG 216
+++C G ++ +AH P G + + G+ +HS +Y + + V V+G
Sbjct: 165 AVVVCNGHYTEPNIAHIP------GIKSWPGKQIHSHNYR------VPDPFENEVVVVIG 212
Query: 217 SGKSAFDTVAECA 229
+ S D + A
Sbjct: 213 NFASGADISRDIA 225
>AT2G33230.1 | chr2:14080411-14081971 REVERSE LENGTH=432
Length = 431
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 88/218 (40%), Gaps = 37/218 (16%)
Query: 9 AIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWR-RTLASTRLQTPAFAYRFSDFP 67
IVGAG SGL A L + P V + + +W+ RT +L P + + P
Sbjct: 33 VIVGAGPSGL-AVAADLKRQEVPFVILERANCIASLWQNRTYDRLKLHLPKQFCQLPNLP 91
Query: 68 WPADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAAWERWS 127
+P D+ +P Q +EYL +YA + +F V +A+Y D+ W +
Sbjct: 92 FPEDIPE---YPTKYQFIEYLESYATHFDLRP--KFNETVQSAKY----DKRFGLWRVQT 142
Query: 128 G-NGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLILCTGRFSGVAHTPTFPPNRGPEVFH 186
E G E++ +L++ TG + P G E F
Sbjct: 143 VLRSELLGYCEFEYICR---------------WLVVATGENA----EKVVPEFEGLEDFG 183
Query: 187 GQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDT 224
G VLH+ DY + E RGKRV VVG G S +
Sbjct: 184 GDVLHAGDYK------SGERYRGKRVLVVGCGNSGMEV 215
>AT1G63370.1 | chr1:23503205-23505358 REVERSE LENGTH=451
Length = 450
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 56/247 (22%)
Query: 8 VAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRRT---------LASTRLQTPA 58
VA++GAG +GL A + +G VVFE VGG W T + TR +
Sbjct: 13 VAVIGAGPAGLVAARELRREGHSVVVFEKQKQ-VGGTWIYTDEVESDPLSVDPTRSVVHS 71
Query: 59 FAYR------------FSDFPWPADVSGAEV----FPRHDQVVEYLAAYARRHGVTECVR 102
YR + DFP+ SG FP H +V+ YL +A+ G+ E VR
Sbjct: 72 SVYRSLRINGTRECTGYRDFPFVVR-SGVSRDRRRFPSHGEVLAYLKDFAKEFGIEEMVR 130
Query: 103 FGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLIL 162
F +V+ A +G G+W + + + D +++
Sbjct: 131 FETEVVKVSPAA-------------------EEGIGKWRIESTEKEKKVRRDEIYDAVVV 171
Query: 163 CTGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAF 222
C G + P G + G+ +HS +Y E R K ++G+ SA
Sbjct: 172 CNGHYV----EPRLAQIPGISSWPGKEMHSHNYR------IPEPFRDKVAVLIGNSSSAE 221
Query: 223 DTVAECA 229
D + A
Sbjct: 222 DISRDIA 228
>AT5G25620.2 | chr5:8935312-8938200 REVERSE LENGTH=427
Length = 426
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 86/236 (36%), Gaps = 44/236 (18%)
Query: 9 AIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWR-RTLASTRLQTPAFAYRFSDFP 67
IVGAG SGL +G V+ E + + + +W+ +T L P P
Sbjct: 25 VIVGAGPSGLATAACLKERGITSVLLERS-NCIASLWQLKTYDRLHLHLPKQFCELPIIP 83
Query: 68 WPADVSGAEVFPRHDQVVEYLAAYARRHGVTECVRFGCKVLAAEYAGVPDEEAAAWERWS 127
+P D +P Q +EYL YARR + F V +A + DE W
Sbjct: 84 FPGDFP---TYPTKQQFIEYLEDYARRFDIKP--EFNQTVESAAF----DENLGMWR--- 131
Query: 128 GNGEAFGDGSGEWLLTVQHPGSEATQIHRVDFLILCTGRFSGVAHTPTFPPNRGPEVF-- 185
V G E T + +L+ TG + P P G + F
Sbjct: 132 ----------------VTSVGEEGTTEYVCRWLVAATGENA----EPVVPRFEGMDKFAA 171
Query: 186 HGQVLHSMDYSNMGHAAADELIRGKRVAVVGSGKSAFDTVAECAAANGGRYPCAMI 241
G V H+ Y G A GKRV VVG G S + + N G P ++
Sbjct: 172 AGVVKHTCHYKTGGDFA------GKRVLVVGCGNSGMEVCLD--LCNFGAQPSLVV 219
>AT1G62580.1 | chr1:23173333-23176931 FORWARD LENGTH=498
Length = 497
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 91/227 (40%), Gaps = 58/227 (25%)
Query: 3 ATKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRRT-------------- 48
T VA++GAGA+GL A + +G VVFE G+ +GGVW T
Sbjct: 9 TTSNHVAVIGAGAAGLVAARELRREGHSVVVFE-RGNHIGGVWAYTPNVEPDPLSIDPTR 67
Query: 49 -------LASTRLQTPAFAYRFSDFPWPADVSGAEVFPR----HDQVVEYLAAYARRHGV 97
+S R P F+DFP+ + PR H +V+ YL + R +
Sbjct: 68 PVIHSSLYSSLRTIIPQECMGFTDFPFSTRLENGSRDPRRHPGHSEVLAYLRDFVREFKI 127
Query: 98 TECVRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRV 157
E +RF +V+ E AG E W S N FGD S E
Sbjct: 128 EEMIRFETEVVRVEQAG---ENPKKWRVKSRN---FGDISDEIY---------------- 165
Query: 158 DFLILCTGRFSGVAHTPTFPPNR---------GPEVFHGQVLHSMDY 195
D +++C G ++ H P N+ G + + G+ +HS +Y
Sbjct: 166 DAVVVCNGHYTEPRHA-LIPGNKINHSFSIGLGIDTWPGKQIHSHNY 211
>AT1G12200.1 | chr1:4137627-4139835 FORWARD LENGTH=466
Length = 465
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 55/252 (21%)
Query: 3 ATKKRVAIVGAGASGLTACKHALAKGFRPVVFEAAGDGVGGVWRRT---------LASTR 53
T + VA++GAGA+GL A + +G VV E G +GGVW T L TR
Sbjct: 9 TTSRHVAVIGAGAAGLVAARELRREGHSVVVLER-GSQIGGVWAYTSQVEPDPLSLDPTR 67
Query: 54 LQTPAFAYR------------FSDFPW---PADVS-GAEVFPRHDQVVEYLAAYARRHGV 97
+ YR F+DFP+ P D S P H +V+ YL +A+ +
Sbjct: 68 PVVHSSLYRSLRTNIPRECMGFTDFPFATRPHDGSRDPRRHPAHTEVLAYLRDFAKEFDI 127
Query: 98 TECVRFGCKVLAAEYAGVPDEEAAAWERWSGNGEAFGDGSGEWLLTVQHPGSEATQIHRV 157
E VRF +V+ AE EE W S + + D +I+
Sbjct: 128 EEMVRFETEVVKAEQVAAEGEERGKWRVESRSSDGVVD-----------------EIY-- 168
Query: 158 DFLILCTGRFSGVAHTPTFPPNRGPEVFHGQVLHSMDYSNMGHAAADELIRGKRVAVVGS 217
D +++C G ++ H G + + G+ +HS +Y + + + V V+GS
Sbjct: 169 DAVVVCNGHYTEPRHALI----TGIDSWPGKQIHSHNYR------VPDQFKDQVVIVIGS 218
Query: 218 GKSAFDTVAECA 229
S D + A
Sbjct: 219 SASGVDICRDIA 230
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,657,987
Number of extensions: 431335
Number of successful extensions: 916
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 903
Number of HSP's successfully gapped: 22
Length of query: 517
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 414
Effective length of database: 8,282,721
Effective search space: 3429046494
Effective search space used: 3429046494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)