Os06g0202100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0202100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.42 | 0.704 | 8.06 | 1.65 | 1.94 | -1.38 | 0.224 | 3.14 | 0.54 | 6.54 | 16.4 | 665 | -- | -- |
| 231.17 | 0.708 | 8.13 | 1.05 | 1.9 | -1.41 | -0.31 | -- | 0.384 | 6.78 | 12.31 | 543 | -- | -- |
| 224.49 | 0.698 | 8.06 | 1.67 | 1.98 | -1.36 | -- | 3.06 | 0.537 | 6.48 | 16.44 | 721 | -- | -- |
| 231.55 | 0.709 | 8.13 | 1.07 | 1.92 | -1.43 | -- | -- | 0.382 | 6.62 | 10.62 | 613 | -- | -- |
| 335.07 | 0.853 | 8.11 | 1.73 | -- | -2.69 | -- | 3.44 | 0.634 | -- | 24.3 | 517 | -- | -- |
| 256.2 | 0.75 | 8.17 | 0.714 | 2.27 | -- | -0.262 | -- | 0.159 | 6.78 | -- | -- | -- | -- |
| 256.37 | 0.75 | 8.17 | 0.709 | 2.27 | -- | -- | -- | 0.16 | 6.77 | -- | -- | -- | -- |
| 347.43 | 0.868 | 8.16 | 1.22 | -- | -2.5 | -- | -- | 0.436 | -- | 24.4 | 522 | -- | -- |
| 257.39 | 0.747 | 8.17 | -- | 2.01 | -0.982 | -- | -- | 0.202 | 6.78 | 7.745 | 485 | -- | -- |
| 526.21 | 1.07 | 8.22 | 0.76 | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
| 269.63 | 0.768 | 8.19 | -- | 2.28 | -- | -- | -- | 0.0812 | 6.76 | -- | -- | -- | -- |
| 384.99 | 0.914 | 8.2 | -- | -- | -2.3 | -- | -- | 0.281 | -- | 24.5 | 509 | -- | -- |
| 541.45 | 1.09 | 8.24 | -- | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.42 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 2 | 221.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 3 | 221.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 15 | 222.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 34 | 223.11 | radiation | 10 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 35 | 223.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 85 | 224.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 113 | 224.61 | temperature | 15 | 720 | > th | dose dependent | sin | 21 | NA |
| 126 | 224.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 139 | 224.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 153 | 224.96 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 263 | 225.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 15 |
| 274 | 226.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 275 | 226.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 317 | 226.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 340 | 226.43 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 17 |
| 402 | 226.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 17 |
| 464 | 227.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 471 | 227.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 509 | 227.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 528 | 227.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 539 | 227.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 540 | 227.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 563 | 227.57 | temperature | 30 | 270 | < th | dose dependent | sin | 18 | NA |
| 616 | 227.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 640 | 227.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 647 | 227.83 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 660 | 227.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 690 | 227.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 704 | 228.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 780 | 228.21 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 783 | 228.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 794 | 228.25 | humidity | 70 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 822 | 228.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 834 | 228.34 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 842 | 228.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 881 | 228.44 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 924 | 228.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 928 | 228.54 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |