Os06g0199500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (AtCoaC).
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Os06g0199500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (AtCoaC).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.47 | 0.276 | 8.89 | 0.191 | 1.51 | 0.616 | -0.474 | 1.13 | 0.124 | 4.38 | 21.26 | 1402 | -- | -- |
| 38.01 | 0.287 | 8.92 | 0.0867 | 1.52 | 0.52 | -0.216 | -- | 0.111 | 4.31 | 21.5 | 1433 | -- | -- |
| 34.98 | 0.275 | 8.9 | 0.218 | 1.51 | 0.586 | -- | 1.1 | 0.125 | 4.39 | 21.4 | 1423 | -- | -- |
| 37.89 | 0.287 | 8.93 | -0.0267 | 1.54 | 0.519 | -- | -- | 0.0658 | 4.31 | 21.6 | 1765 | -- | -- |
| 155.65 | 0.581 | 8.91 | 0.185 | -- | 0.748 | -- | 1.02 | 0.122 | -- | 21.39 | 1230 | -- | -- |
| 44.46 | 0.313 | 8.9 | 0.137 | 1.53 | -- | -0.489 | -- | 0.206 | 4.36 | -- | -- | -- | -- |
| 45.11 | 0.315 | 8.9 | 0.142 | 1.53 | -- | -- | -- | 0.209 | 4.37 | -- | -- | -- | -- |
| 157.17 | 0.584 | 8.95 | 0.00887 | -- | 0.573 | -- | -- | 0.0509 | -- | 22.3 | 1177 | -- | -- |
| 37.48 | 0.285 | 8.92 | -- | 1.5 | 0.478 | -- | -- | 0.0754 | 4.45 | 21.55 | 1261 | -- | -- |
| 170.39 | 0.61 | 8.91 | 0.202 | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
| 45.64 | 0.316 | 8.9 | -- | 1.53 | -- | -- | -- | 0.193 | 4.37 | -- | -- | -- | -- |
| 149.38 | 0.569 | 8.97 | -- | -- | 0.769 | -- | -- | -0.0334 | -- | 24.9 | 1162 | -- | -- |
| 171.46 | 0.611 | 8.91 | -- | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.25 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 13 | 35.47 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 16 | 35.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 17 | 35.55 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 21 | 35.56 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 24 | 35.59 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 30 | 35.63 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 33 | 35.64 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 94 | 35.77 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 223 | 36.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 297 | 36.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 303 | 36.34 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 345 | 36.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 352 | 36.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 353 | 36.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 356 | 36.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 363 | 36.48 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 364 | 36.48 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 366 | 36.49 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 386 | 36.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 406 | 36.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 407 | 36.59 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 408 | 36.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 419 | 36.60 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 443 | 36.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 475 | 36.65 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 487 | 36.66 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 493 | 36.66 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 494 | 36.67 | temperature | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 527 | 36.72 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 551 | 36.73 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 556 | 36.73 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 558 | 36.73 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 571 | 36.74 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 576 | 36.75 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 621 | 36.77 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 21 |
| 675 | 36.82 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 678 | 36.83 | temperature | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 684 | 36.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 21 |
| 716 | 36.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 726 | 36.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 736 | 36.86 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 737 | 36.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 783 | 36.89 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 796 | 36.90 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 830 | 36.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 915 | 36.97 | temperature | 25.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 931 | 36.99 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 933 | 36.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 934 | 36.99 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 965 | 37.01 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 977 | 37.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |