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Os06g0198700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.93 (0.0166) R2 : 0.00144
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0283 (0.0349) R2dN8 : 0.00186 R2N8 : 0.00144
σ : 0.312
deviance : 44.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.63 0.276 9.95 -0.00936 0.338 0.406 0.347 0.522 -0.0445 18.5 68 5329 -- --
34.99 0.275 9.95 -0.0246 0.336 0.438 0.391 -- -0.0504 18.5 69 5327 -- --
34.87 0.275 9.95 -0.0139 0.322 0.377 -- 0.627 -0.0414 18.8 68.23 5155 -- --
35.33 0.277 9.95 -0.0325 0.336 0.431 -- -- -0.0476 18.6 69 5328 -- --
39.86 0.294 9.95 -0.0172 -- 0.502 -- 0.505 -0.0774 -- 69.13 5064 -- --
37.66 0.288 9.94 -0.0374 0.358 -- 0.307 -- -0.028 18.9 -- -- -- --
37.89 0.288 9.94 -0.0434 0.358 -- -- -- -0.0274 19 -- -- -- --
40.24 0.295 9.95 -0.0272 -- 0.503 -- -- -0.0837 -- 70 5064 -- --
35.35 0.277 9.95 -- 0.336 0.433 -- -- -0.0443 18.6 68.75 5328 -- --
44.65 0.312 9.94 -0.0505 -- -- -- -- -0.0339 -- -- -- -- --
37.94 0.288 9.94 -- 0.359 -- -- -- -0.0226 19 -- -- -- --
40.26 0.296 9.95 -- -- 0.535 -- -- -0.0821 -- 69.68 5066 -- --
44.71 0.312 9.93 -- -- -- -- -- -0.0283 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.78 wind 1.0 43200 > th dose independent rect. 4 9
2 31.99 wind 3.0 43200 < th dose dependent rect. 5 1
4 32.13 wind 1.0 43200 < th dose independent rect. 4 9
8 32.42 wind 5.0 43200 < th dose dependent rect. 1 1
9 32.42 wind 3.0 43200 < th dose dependent rect. 22 9
12 32.47 wind 1.0 43200 > th dose independent rect. 22 15
34 32.69 wind 1.0 43200 > th dose independent sin 4 NA
35 32.69 wind 1.0 43200 < th dose independent rect. 21 16
36 32.69 wind 1.0 43200 < th dose dependent rect. 12 1
38 32.71 wind 1.0 43200 > th dose independent rect. 3 14
51 32.76 wind 1.0 43200 < th dose independent rect. 19 18
56 32.78 precipitation 0.1 14400 > th dose dependent rect. 4 13
68 32.81 wind 1.0 43200 < th dose dependent rect. 4 9
77 32.83 wind 1.0 43200 < th dose independent rect. 16 21
78 32.84 wind 1.0 43200 > th dose dependent rect. 1 1
90 32.90 wind 1.0 43200 < th dose independent rect. 22 19
95 32.91 wind 1.0 43200 > th dose independent rect. 16 20
105 32.95 wind 1.0 43200 > th dose independent rect. 1 16
110 32.96 precipitation 0.1 14400 < th dose independent rect. 4 13
113 32.96 precipitation 0.1 14400 < th dose dependent rect. 4 13
115 32.97 wind 1.0 43200 < th dose independent rect. 3 14
119 32.98 wind 1.0 43200 < th dose independent sin 3 NA
122 32.98 precipitation 0.1 14400 > th dose independent rect. 4 13
153 33.04 wind 1.0 43200 > th dose independent rect. 11 21
155 33.04 wind 1.0 43200 < th dose independent rect. 1 23
159 33.05 precipitation 0.1 14400 > th dose independent rect. 4 16
160 33.05 precipitation 0.1 14400 < th dose independent rect. 4 16
162 33.05 precipitation 0.1 14400 < th dose dependent rect. 4 16
163 33.06 precipitation 0.1 14400 < th dose independent rect. 16 1
169 33.06 precipitation 0.1 14400 < th dose dependent rect. 16 1
183 33.08 precipitation 0.1 14400 > th dose independent rect. 15 2
187 33.08 wind 1.0 43200 < th dose independent rect. 3 21
196 33.09 wind 1.0 43200 > th dose independent rect. 5 2
199 33.09 wind 1.0 43200 < th dose independent rect. 10 22
209 33.10 precipitation 0.1 14400 > th dose dependent rect. 15 2
236 33.14 wind 1.0 43200 > th dose independent rect. 1 22
237 33.14 wind 1.0 43200 < th dose independent rect. 3 23
241 33.15 precipitation 0.1 14400 < th dose independent rect. 9 8
245 33.15 precipitation 0.1 14400 < th dose dependent rect. 9 8
272 33.18 precipitation 0.1 14400 > th dose dependent rect. 9 8
278 33.20 precipitation 0.1 14400 > th dose independent rect. 9 8
281 33.20 wind 1.0 43200 > th dose independent rect. 3 20
287 33.21 humidity 60.0 14400 > th dose independent rect. 16 1
298 33.22 wind 1.0 43200 < th dose independent rect. 3 17
304 33.22 precipitation 0.1 14400 > th dose dependent rect. 18 1
337 33.25 wind 1.0 43200 < th dose independent no NA NA
364 33.27 precipitation 0.1 14400 > th dose dependent rect. 3 17
373 33.28 wind 1.0 43200 < th dose dependent rect. 3 21
384 33.30 humidity 80.0 14400 < th dose independent rect. 6 1
405 33.31 wind 1.0 43200 < th dose dependent rect. 6 5
410 33.32 humidity 80.0 14400 > th dose independent rect. 6 1
420 33.33 wind 3.0 14400 < th dose independent rect. 24 2
426 33.33 humidity 70.0 1440 > th dose dependent rect. 11 1
428 33.33 wind 1.0 43200 < th dose dependent rect. 4 13
429 33.34 wind 9.0 14400 < th dose independent rect. 10 1
436 33.34 wind 3.0 43200 < th dose dependent sin 9 NA
440 33.34 wind 1.0 43200 < th dose dependent rect. 4 18
442 33.35 humidity 80.0 1440 < th dose independent rect. 11 1
471 33.37 wind 1.0 43200 > th dose independent rect. 3 23
475 33.37 wind 3.0 43200 < th dose dependent rect. 22 16
476 33.38 precipitation 0.1 14400 > th dose independent rect. 18 1
495 33.39 humidity 80.0 1440 < th dose independent rect. 8 6
507 33.41 wind 3.0 14400 < th dose independent rect. 24 6
515 33.42 wind 1.0 43200 > th dose independent no NA NA
516 33.42 wind 9.0 14400 < th dose independent rect. 12 1
517 33.42 radiation 1.0 1440 < th dose independent rect. 11 1
518 33.42 wind 3.0 14400 < th dose independent rect. 22 8
522 33.42 radiation 1.0 1440 < th dose dependent rect. 11 1
537 33.44 precipitation 0.1 14400 < th dose independent rect. 18 1
543 33.44 precipitation 0.1 14400 < th dose dependent rect. 18 1
548 33.45 wind 3.0 14400 < th dose independent rect. 5 1
556 33.46 humidity 60.0 14400 < th dose independent rect. 15 2
563 33.46 wind 1.0 43200 < th dose dependent sin 2 NA
568 33.47 precipitation 0.1 14400 < th dose independent sin 1 NA
574 33.47 precipitation 0.1 14400 < th dose dependent sin 1 NA
582 33.48 precipitation 0.1 14400 > th dose dependent sin 2 NA
587 33.49 precipitation 0.1 14400 > th dose independent sin 1 NA
591 33.49 humidity 80.0 1440 < th dose independent rect. 5 9
597 33.50 wind 3.0 14400 < th dose independent rect. 24 4
605 33.50 wind 1.0 43200 > th dose dependent rect. 5 1
609 33.51 precipitation 0.1 14400 > th dose independent rect. 9 11
610 33.51 precipitation 0.1 14400 < th dose independent rect. 9 11
612 33.51 precipitation 0.1 14400 > th dose independent rect. 7 13
613 33.51 precipitation 0.1 14400 < th dose independent rect. 7 13
619 33.51 precipitation 0.1 14400 < th dose dependent rect. 9 11
621 33.51 precipitation 0.1 14400 < th dose dependent rect. 7 13
642 33.53 humidity 60.0 14400 < th dose dependent rect. 14 3
651 33.54 humidity 60.0 14400 > th dose independent rect. 15 18
659 33.55 humidity 60.0 43200 > th dose independent rect. 9 1
669 33.56 humidity 70.0 1440 > th dose independent rect. 11 1
674 33.56 humidity 90.0 14400 < th dose dependent rect. 2 1
683 33.57 humidity 80.0 14400 > th dose independent rect. 2 5
684 33.57 precipitation 0.1 14400 > th dose independent rect. 15 5
701 33.58 precipitation 0.1 14400 < th dose independent rect. 15 5
712 33.58 precipitation 0.1 14400 < th dose dependent rect. 15 5
727 33.59 precipitation 0.1 14400 < th dose independent rect. 12 8
734 33.59 precipitation 0.1 14400 < th dose dependent rect. 12 8
768 33.61 wind 3.0 14400 > th dose independent rect. 24 2
771 33.61 wind 3.0 14400 > th dose independent rect. 22 8
782 33.62 wind 3.0 14400 > th dose independent rect. 24 6
842 33.65 humidity 60.0 14400 < th dose dependent rect. 14 20
845 33.66 humidity 80.0 1440 > th dose independent rect. 8 6
853 33.66 wind 9.0 43200 > th dose dependent rect. 12 1
865 33.67 humidity 60.0 14400 < th dose independent rect. 15 19
874 33.68 wind 1.0 4320 > th dose independent rect. 17 2
978 33.74 wind 1.0 14400 > th dose dependent rect. 23 7