Os06g0192400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os06g0192400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.43 | 0.518 | 3.01 | -0.556 | 0.0889 | 1.02 | -0.0968 | -4.51 | 0.0949 | 5.87 | 1000 | 1398 | -- | -- |
| 122.66 | 0.516 | 2.97 | -0.266 | 0.0915 | 0.817 | -0.076 | -- | 0.0828 | 5.94 | 992.3 | 2007 | -- | -- |
| 121.45 | 0.513 | 3.01 | -0.563 | 0.0892 | 1.04 | -- | -4.61 | 0.0958 | 6.3 | 999.9 | 1362 | -- | -- |
| 122.68 | 0.516 | 2.97 | -0.266 | 0.0894 | 0.812 | -- | -- | 0.0814 | 5.72 | 992.4 | 2198 | -- | -- |
| 121.86 | 0.514 | 3.02 | -0.562 | -- | 1.04 | -- | -4.62 | 0.0969 | -- | 1000 | 1360 | -- | -- |
| 124.58 | 0.523 | 2.97 | -0.295 | 0.0895 | -- | -0.0761 | -- | 0.071 | 6.28 | -- | -- | -- | -- |
| 124.59 | 0.523 | 2.97 | -0.295 | 0.0892 | -- | -- | -- | 0.0713 | 6.5 | -- | -- | -- | -- |
| 123.09 | 0.517 | 2.97 | -0.264 | -- | 0.808 | -- | -- | 0.0832 | -- | 992.5 | 2360 | -- | -- |
| 124.52 | 0.52 | 2.97 | -- | 0.0852 | 0.897 | -- | -- | 0.112 | 5.77 | 993.4 | 2289 | -- | -- |
| 125 | 0.522 | 2.98 | -0.293 | -- | -- | -- | -- | 0.0731 | -- | -- | -- | -- | -- |
| 126.89 | 0.527 | 2.97 | -- | 0.0855 | -- | -- | -- | 0.104 | 6.7 | -- | -- | -- | -- |
| 124.84 | 0.52 | 2.96 | -- | -- | 0.886 | -- | -- | 0.114 | -- | 993.7 | 2671 | -- | -- |
| 127.27 | 0.527 | 2.97 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.52 | temperature | 30 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 109.60 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 16 |
| 16 | 109.61 | temperature | 30 | 90 | > th | dose independent | rect. | 8 | 1 |
| 44 | 109.63 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 19 |
| 111 | 110.30 | temperature | 30 | 90 | > th | dose independent | rect. | 18 | 16 |
| 217 | 115.20 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 218 | 115.21 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 7 | 3 |
| 220 | 115.55 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 237 | 116.39 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 6 | 1 |
| 250 | 116.93 | humidity | 70 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 256 | 117.33 | temperature | 30 | 10 | > th | dose independent | rect. | 16 | 19 |
| 288 | 117.56 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 289 | 117.61 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 293 | 117.65 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 312 | 117.66 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 318 | 117.81 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 320 | 117.84 | radiation | 40 | 10 | > th | dose independent | sin | 11 | NA |
| 333 | 118.04 | temperature | 30 | 10 | > th | dose dependent | sin | 10 | NA |
| 375 | 118.14 | humidity | 70 | 90 | < th | dose independent | rect. | 8 | 1 |
| 390 | 118.49 | radiation | 40 | 10 | > th | dose dependent | sin | 11 | NA |
| 392 | 118.49 | radiation | 40 | 10 | > th | dose dependent | rect. | 9 | 2 |
| 482 | 118.69 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 8 |
| 485 | 118.72 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 5 | 8 |
| 487 | 118.74 | temperature | 30 | 10 | > th | dose independent | sin | 10 | NA |
| 493 | 118.78 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 519 | 118.87 | temperature | 30 | 90 | > th | dose independent | sin | 10 | NA |
| 554 | 119.02 | radiation | 10 | 10 | > th | dose dependent | rect. | 7 | 3 |
| 601 | 119.18 | radiation | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 708 | 119.53 | temperature | 30 | 90 | < th | dose independent | sin | 9 | NA |
| 899 | 119.95 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 965 | 120.06 | radiation | 20 | 90 | > th | dose independent | rect. | 7 | 2 |