Os06g0182500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin interacting motif domain containing protein.
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Os06g0182500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin interacting motif domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.35 | 0.196 | 10.3 | -0.387 | 0.447 | -0.412 | 0.0523 | 1.37 | 0.0671 | 5.65 | 23.57 | 1151 | -- | -- |
| 18.29 | 0.199 | 10.3 | -0.298 | 0.425 | -0.796 | -0.0138 | -- | 0.11 | 5.74 | 19.49 | 2365 | -- | -- |
| 17.36 | 0.194 | 10.3 | -0.386 | 0.448 | -0.409 | -- | 1.36 | 0.0664 | 5.67 | 23.68 | 1138 | -- | -- |
| 18.22 | 0.199 | 10.3 | -0.278 | 0.45 | -0.813 | -- | -- | 0.111 | 5.66 | 19.41 | 2318 | -- | -- |
| 27.63 | 0.245 | 10.3 | -0.42 | -- | -0.482 | -- | 1.38 | 0.0488 | -- | 24.6 | 1240 | -- | -- |
| 24.09 | 0.23 | 10.2 | -0.0126 | 0.462 | -- | -0.088 | -- | 0.21 | 5.36 | -- | -- | -- | -- |
| 24.11 | 0.23 | 10.2 | -0.0127 | 0.461 | -- | -- | -- | 0.211 | 5.38 | -- | -- | -- | -- |
| 28.2 | 0.247 | 10.3 | -0.294 | -- | -0.886 | -- | -- | 0.113 | -- | 19.3 | 2631 | -- | -- |
| 19.65 | 0.206 | 10.2 | -- | 0.439 | -0.835 | -- | -- | 0.163 | 5.44 | 19.6 | 1405 | -- | -- |
| 35.21 | 0.277 | 10.2 | 0.00293 | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
| 24.11 | 0.23 | 10.2 | -- | 0.461 | -- | -- | -- | 0.212 | 5.38 | -- | -- | -- | -- |
| 29.68 | 0.254 | 10.2 | -- | -- | -0.924 | -- | -- | 0.171 | -- | 19.48 | 1297 | -- | -- |
| 35.21 | 0.277 | 10.2 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 16 | 17.19 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 49 | 17.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 63 | 17.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 91 | 17.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 108 | 17.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 116 | 17.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 133 | 17.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 138 | 17.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 140 | 17.44 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 141 | 17.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 144 | 17.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 16 |
| 184 | 17.48 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 206 | 17.50 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 219 | 17.51 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 228 | 17.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 9 |
| 247 | 17.52 | temperature | 20 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 345 | 17.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 368 | 17.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 370 | 17.60 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 420 | 17.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 14 |
| 430 | 17.64 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 434 | 17.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 467 | 17.65 | radiation | 20 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 482 | 17.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 515 | 17.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 522 | 17.67 | radiation | 30 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 527 | 17.67 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 528 | 17.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 530 | 17.67 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 574 | 17.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 585 | 17.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 656 | 17.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 659 | 17.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 698 | 17.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 706 | 17.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 709 | 17.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 710 | 17.71 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 748 | 17.72 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 793 | 17.73 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 801 | 17.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 911 | 17.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 945 | 17.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 6 |