Os06g0177000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein).
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Os06g0177000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.35 | 0.267 | 14.5 | -0.453 | 0.135 | 0.515 | -0.211 | -0.636 | -1.03 | 1.41 | 25.11 | 4321 | -- | -- |
| 32.64 | 0.266 | 14.5 | -0.347 | 0.142 | 0.473 | -0.254 | -- | -1.03 | 1.35 | 24.4 | 4364 | -- | -- |
| 32.52 | 0.266 | 14.5 | -0.446 | 0.134 | 0.515 | -- | -0.655 | -1.03 | 1.19 | 25.3 | 4329 | -- | -- |
| 32.65 | 0.266 | 14.5 | -0.289 | 0.14 | 0.451 | -- | -- | -0.996 | 1.17 | 25.38 | 4356 | -- | -- |
| 33.58 | 0.27 | 14.5 | -0.452 | -- | 0.546 | -- | -0.691 | -1.03 | -- | 25.22 | 4215 | -- | -- |
| 38.67 | 0.292 | 14.5 | -0.148 | 0.167 | -- | -0.177 | -- | -0.981 | 1.35 | -- | -- | -- | -- |
| 38.79 | 0.292 | 14.5 | -0.142 | 0.167 | -- | -- | -- | -0.98 | 1.23 | -- | -- | -- | -- |
| 33.75 | 0.271 | 14.5 | -0.29 | -- | 0.471 | -- | -- | -0.998 | -- | 25.3 | 4239 | -- | -- |
| 34.61 | 0.274 | 14.5 | -- | 0.137 | 0.372 | -- | -- | -0.952 | 1.06 | 26.11 | 4330 | -- | -- |
| 40.51 | 0.297 | 14.5 | -0.135 | -- | -- | -- | -- | -0.977 | -- | -- | -- | -- | -- |
| 39.32 | 0.293 | 14.5 | -- | 0.164 | -- | -- | -- | -0.965 | 1.19 | -- | -- | -- | -- |
| 35.71 | 0.278 | 14.5 | -- | -- | 0.396 | -- | -- | -0.949 | -- | 26.1 | 4232 | -- | -- |
| 40.99 | 0.299 | 14.5 | -- | -- | -- | -- | -- | -0.962 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.90 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 2 | 29.92 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 5 | 29.97 | wind | 9 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 9 | 29.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 35 | 30.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 46 | 30.21 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 49 | 30.21 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 50 | 30.21 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 51 | 30.22 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 68 | 30.25 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 81 | 30.26 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 136 | 30.32 | humidity | 80 | 14400 | > th | dose dependent | sin | 15 | NA |
| 158 | 30.33 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 22 |
| 165 | 30.34 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 166 | 30.34 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 174 | 30.35 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 188 | 30.36 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 238 | 30.39 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 310 | 30.46 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 359 | 30.49 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 398 | 30.51 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 411 | 30.51 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 425 | 30.52 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 470 | 30.54 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 495 | 30.55 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 516 | 30.56 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 617 | 30.60 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 618 | 30.60 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 638 | 30.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 643 | 30.61 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 663 | 30.62 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 721 | 30.65 | humidity | 80 | 14400 | > th | dose independent | sin | 20 | NA |
| 731 | 30.65 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 801 | 30.67 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 812 | 30.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 815 | 30.68 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 816 | 30.68 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 22 |
| 853 | 30.70 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 939 | 30.72 | humidity | 80 | 14400 | > th | dose dependent | sin | 3 | NA |
| 951 | 30.73 | humidity | 80 | 14400 | < th | dose independent | sin | 20 | NA |
| 957 | 30.73 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 961 | 30.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 965 | 30.73 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 976 | 30.74 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 986 | 30.74 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 23 |