Os06g0175900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein).
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Os06g0175900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.99 | 0.194 | 15.3 | -0.188 | 0.304 | -0.2 | 0.114 | -1.62 | -0.844 | 23.8 | 14.44 | 2959 | -- | -- |
| 18.87 | 0.202 | 15.2 | 0.179 | 0.337 | -0.217 | -0.0146 | -- | -0.737 | 0.807 | 22.99 | 1262 | -- | -- |
| 17.04 | 0.192 | 15.3 | -0.191 | 0.303 | -0.203 | -- | -1.63 | -0.845 | 23.7 | 14.49 | 3007 | -- | -- |
| 18.14 | 0.198 | 15.2 | 0.193 | 0.304 | -0.249 | -- | -- | -0.785 | 23.5 | 27.6 | 1663 | -- | -- |
| 22.76 | 0.222 | 15.3 | -0.195 | -- | -0.168 | -- | -1.64 | -0.849 | -- | 14.6 | 3078 | -- | -- |
| 20.16 | 0.211 | 15.2 | 0.136 | 0.294 | -- | 0.0942 | -- | -0.775 | 23.6 | -- | -- | -- | -- |
| 20.2 | 0.21 | 15.2 | 0.132 | 0.293 | -- | -- | -- | -0.775 | 23.6 | -- | -- | -- | -- |
| 23.3 | 0.226 | 15.2 | 0.213 | -- | -0.397 | -- | -- | -0.718 | -- | 14.6 | 3078 | -- | -- |
| 19.09 | 0.203 | 15.2 | -- | 0.304 | -0.213 | -- | -- | -0.83 | 23.7 | 29.41 | 1598 | -- | -- |
| 25.61 | 0.236 | 15.2 | 0.14 | -- | -- | -- | -- | -0.772 | -- | -- | -- | -- | -- |
| 20.66 | 0.213 | 15.2 | -- | 0.295 | -- | -- | -- | -0.79 | 23.7 | -- | -- | -- | -- |
| 24.43 | 0.231 | 15.2 | -- | -- | -0.331 | -- | -- | -0.749 | -- | 14.6 | 3078 | -- | -- |
| 26.13 | 0.239 | 15.2 | -- | -- | -- | -- | -- | -0.787 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.66 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 8 | 16.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 112 | 16.87 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 113 | 16.87 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 157 | 16.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 160 | 16.93 | temperature | 15 | 4320 | > th | dose dependent | sin | 15 | NA |
| 180 | 16.95 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 187 | 16.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 298 | 17.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 306 | 17.04 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 360 | 17.07 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 407 | 17.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 522 | 17.13 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 562 | 17.14 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 654 | 17.16 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
| 711 | 17.17 | temperature | 15 | 4320 | > th | dose dependent | rect. | 2 | 23 |
| 757 | 17.18 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 759 | 17.19 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 815 | 17.20 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 2 |