Os06g0167400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Di-trans-poly-cis-decaprenylcistransferase family protein.
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Os06g0167400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Di-trans-poly-cis-decaprenylcistransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.71 | 0.614 | 12 | -1.59 | 3.95 | -1.18 | 2.01 | 0.768 | -1.53 | 7.62 | 19.67 | 1344 | -- | -- |
| 171.84 | 0.611 | 12 | -1.52 | 3.97 | -1.17 | 2.04 | -- | -1.52 | 7.62 | 19.67 | 1313 | -- | -- |
| 181.11 | 0.627 | 12 | -1.57 | 3.97 | -1.21 | -- | 1.08 | -1.53 | 7.6 | 19.56 | 1305 | -- | -- |
| 184.18 | 0.632 | 12 | -1.53 | 3.98 | -1.17 | -- | -- | -1.53 | 7.58 | 19.66 | 1311 | -- | -- |
| 988 | 1.46 | 12.1 | -1.65 | -- | -1.08 | -- | 0.94 | -1.46 | -- | 25.36 | 1479 | -- | -- |
| 220.36 | 0.696 | 12 | -1.42 | 3.87 | -- | 1.95 | -- | -1.26 | 7.44 | -- | -- | -- | -- |
| 230.54 | 0.711 | 12 | -1.37 | 3.88 | -- | -- | -- | -1.26 | 7.37 | -- | -- | -- | -- |
| 987.11 | 1.46 | 12.1 | -1.57 | -- | -1.06 | -- | -- | -1.46 | -- | 25.36 | 1508 | -- | -- |
| 230.04 | 0.706 | 12 | -- | 3.93 | -1.21 | -- | -- | -1.44 | 7.59 | 20 | 18603 | -- | -- |
| 1032.65 | 1.5 | 12 | -1.31 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 280.36 | 0.783 | 11.9 | -- | 3.87 | -- | -- | -- | -1.11 | 7.4 | -- | -- | -- | -- |
| 1023.21 | 1.49 | 12.1 | -- | -- | -1.23 | -- | -- | -1.42 | -- | 30 | 18835 | -- | -- |
| 1077.98 | 1.53 | 12 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 6 | 169.79 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 7 | 170.45 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 8 | 170.63 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 9 | 170.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 13 | 170.93 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 26 | 171.37 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 58 | 172.14 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 67 | 172.52 | humidity | 80.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 82 | 172.79 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 90 | 172.89 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 106 | 173.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 110 | 173.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 113 | 173.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 20 |
| 114 | 173.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 118 | 173.38 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 133 | 173.59 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 158 | 173.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 159 | 173.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 163 | 174.00 | wind | 5.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 165 | 174.07 | humidity | 80.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 166 | 174.08 | wind | 5.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 169 | 174.10 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 177 | 174.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 22 |
| 178 | 174.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 181 | 174.18 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 186 | 174.23 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 206 | 174.45 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 2 |
| 222 | 174.55 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 243 | 174.84 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 254 | 174.91 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 259 | 174.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 19 |
| 261 | 174.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 274 | 175.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 276 | 175.23 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 293 | 175.30 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 305 | 175.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 320 | 175.50 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 321 | 175.50 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 14 |
| 326 | 175.55 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 335 | 175.61 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 336 | 175.62 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 344 | 175.68 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 351 | 175.71 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 361 | 175.76 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 391 | 175.86 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 397 | 175.92 | radiation | 20.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 437 | 176.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 439 | 176.15 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 449 | 176.17 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 452 | 176.17 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 457 | 176.19 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 466 | 176.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 481 | 176.25 | wind | 5.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 516 | 176.30 | radiation | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 529 | 176.31 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 582 | 176.37 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 635 | 176.54 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 641 | 176.56 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 689 | 176.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 700 | 176.87 | temperature | 30.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 763 | 177.10 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 773 | 177.19 | radiation | 20.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 774 | 177.19 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 780 | 177.19 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 792 | 177.21 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 793 | 177.21 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 800 | 177.23 | radiation | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 929 | 177.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 931 | 177.37 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 940 | 177.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 962 | 177.52 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 980 | 177.53 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 995 | 177.62 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 22 | 2 |