Os06g0167000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PRP8 protein (Fragment).
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Os06g0167000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PRP8 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.18 | 0.312 | 13.2 | 1.23 | 0.709 | 0.706 | 0.401 | -0.892 | 0.462 | 19.3 | 70.86 | 1335 | -- | -- |
| 45.16 | 0.313 | 13.2 | 1.16 | 0.714 | 0.696 | 0.376 | -- | 0.448 | 19.2 | 71.48 | 1368 | -- | -- |
| 44.56 | 0.311 | 13.2 | 1.21 | 0.706 | 0.712 | -- | -0.866 | 0.463 | 19.2 | 72.42 | 1351 | -- | -- |
| 45.49 | 0.314 | 13.2 | 1.12 | 0.708 | 0.666 | -- | -- | 0.435 | 19.1 | 71.99 | 1370 | -- | -- |
| 71.05 | 0.393 | 13.2 | 1.2 | -- | 0.825 | -- | -0.954 | 0.454 | -- | 73 | 1358 | -- | -- |
| 51.74 | 0.337 | 13.2 | 1.14 | 0.735 | -- | 0.341 | -- | 0.368 | 19 | -- | -- | -- | -- |
| 52.03 | 0.338 | 13.2 | 1.14 | 0.737 | -- | -- | -- | 0.369 | 18.9 | -- | -- | -- | -- |
| 72.03 | 0.395 | 13.2 | 1.09 | -- | 0.782 | -- | -- | 0.437 | -- | 73.62 | 1369 | -- | -- |
| 74.59 | 0.402 | 13.2 | -- | 0.716 | 0.88 | -- | -- | 0.385 | 18.9 | 83.69 | 1480 | -- | -- |
| 80.49 | 0.419 | 13.2 | 1.12 | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
| 86.08 | 0.434 | 13.3 | -- | 0.724 | -- | -- | -- | 0.242 | 19 | -- | -- | -- | -- |
| 101.14 | 0.468 | 13.2 | -- | -- | 0.871 | -- | -- | 0.373 | -- | 83.12 | 1394 | -- | -- |
| 113.64 | 0.498 | 13.3 | -- | -- | -- | -- | -- | 0.231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.24 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 2 | 42.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 3 | 42.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 8 | 42.78 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 16 | 43.10 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 17 | 43.12 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 18 | 43.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 26 | 43.24 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 33 | 43.25 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 16 |
| 34 | 43.25 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 39 | 43.32 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 52 | 43.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 54 | 43.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 55 | 43.44 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 57 | 43.45 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 59 | 43.46 | humidity | 90.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 60 | 43.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 61 | 43.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 67 | 43.49 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 68 | 43.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 71 | 43.50 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 73 | 43.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 76 | 43.53 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 79 | 43.53 | humidity | 90.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 95 | 43.59 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 16 |
| 101 | 43.60 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 119 | 43.65 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 122 | 43.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 132 | 43.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 138 | 43.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 144 | 43.70 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 145 | 43.70 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 148 | 43.71 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 151 | 43.72 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 20 |
| 184 | 43.78 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 188 | 43.79 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 209 | 43.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 210 | 43.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 211 | 43.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 221 | 43.85 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 224 | 43.85 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 228 | 43.86 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 233 | 43.87 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 237 | 43.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 239 | 43.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 240 | 43.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 242 | 43.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 243 | 43.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 247 | 43.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 252 | 43.88 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 12 | 10 |
| 254 | 43.89 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 255 | 43.89 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 260 | 43.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 278 | 43.90 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 21 |
| 280 | 43.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 288 | 43.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 298 | 43.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 317 | 43.94 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 21 |
| 336 | 43.96 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 354 | 43.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 415 | 44.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 437 | 44.05 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 448 | 44.06 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 455 | 44.06 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 471 | 44.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 479 | 44.09 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 533 | 44.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 546 | 44.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 556 | 44.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 569 | 44.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 582 | 44.16 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 626 | 44.20 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 635 | 44.20 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 662 | 44.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 664 | 44.23 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 666 | 44.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 669 | 44.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 678 | 44.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 691 | 44.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 701 | 44.26 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 737 | 44.28 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 747 | 44.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 760 | 44.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 783 | 44.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 791 | 44.33 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 804 | 44.33 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 15 |
| 815 | 44.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 816 | 44.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 821 | 44.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 822 | 44.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 823 | 44.34 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 859 | 44.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 878 | 44.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 879 | 44.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 880 | 44.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 882 | 44.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 891 | 44.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 910 | 44.38 | humidity | 90.0 | 720 | > th | dose independent | rect. | 15 | 11 |
| 932 | 44.39 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 934 | 44.39 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 944 | 44.40 | humidity | 90.0 | 720 | > th | dose independent | sin | 16 | NA |
| 945 | 44.40 | radiation | 10.0 | 10 | < th | dose independent | sin | 0 | NA |
| 977 | 44.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 998 | 44.42 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 8 |