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Os06g0166400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to TINY-like protein (AP2 domain containing protein RAP2.10) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0373) R2 : 0.67
β1 : 2.8 (0.138) R2dD : 0.316 R2D : 0.158
β2 : 1.6 (0.0971) R2dC : 0.243 R2C : 0.0792
β3 : -1.65 (0.148) R2dE : 0.111 R2E : -0.0892
β4 : -2.03 (0.338) R2dD*C : 0.0272 R2D*C : 0.0056
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.27 (0.0797) R2dN8 : 0.242 R2N8 : 0.13
σ : 0.696
deviance : 223.41
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C
peak time of C : 0.504
E
wheather : humidity
threshold : 83.17
memory length : 868
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
222.76 0.701 12 2.84 1.57 -1.69 -2.32 1.06 1.28 0.189 82.95 792 -- --
223.41 0.696 12 2.8 1.6 -1.65 -2.03 -- 1.27 0.504 83.17 868 -- --
240.95 0.723 12 2.9 1.59 -1.65 -- -0.426 1.33 0.701 83.8 902 -- --
241.15 0.723 12 2.89 1.65 -1.73 -- -- 1.29 0.661 83.44 908 -- --
253.53 0.742 11.9 2.72 -- -2.25 -- 2.56 1.39 -- 96.17 5 -- --
274.51 0.777 11.9 2.6 1.27 -- -2.13 -- 1.33 1.77 -- -- -- --
292.16 0.8 11.9 2.67 1.27 -- -- -- 1.34 1.94 -- -- -- --
265.36 0.759 11.9 2.69 -- -2.15 -- -- 1.38 -- 110.9 5 -- --
443.45 0.981 12 -- 1.65 -1.57 -- -- 1.06 0.839 95 910 -- --
389.61 0.922 11.9 2.72 -- -- -- -- 1.37 -- -- -- -- --
479.45 1.02 12 -- 1.32 -- -- -- 1.04 2 -- -- -- --
456.29 0.995 12 -- -- -2.21 -- -- 1.09 -- 153 2 -- --
584.52 1.13 12 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 213.75 humidity 50 720 > th dose dependent rect. 24 20
5 216.68 humidity 50 720 > th dose dependent rect. 8 20
11 218.12 humidity 90 720 < th dose dependent rect. 12 5
29 219.66 humidity 80 720 < th dose dependent rect. 12 20
30 219.69 humidity 50 720 > th dose dependent rect. 7 13
32 219.85 humidity 50 720 > th dose dependent rect. 8 11
43 220.61 humidity 80 720 < th dose dependent rect. 12 16
99 221.98 humidity 60 720 > th dose independent rect. 24 20
106 222.26 humidity 60 720 > th dose independent rect. 8 20
121 222.54 humidity 80 720 < th dose dependent sin 20 NA
195 223.87 humidity 80 720 < th dose dependent rect. 18 23
213 224.10 humidity 60 720 > th dose independent rect. 8 11
254 224.53 humidity 80 720 < th dose dependent no NA NA
258 224.54 humidity 80 720 < th dose dependent rect. 6 23
259 224.54 humidity 80 720 < th dose dependent rect. 23 23
261 224.55 humidity 80 720 < th dose dependent rect. 4 23
268 224.57 humidity 80 720 < th dose dependent rect. 1 23
420 225.25 humidity 60 1440 > th dose dependent rect. 11 2
439 225.39 humidity 50 720 > th dose dependent sin 23 NA
478 225.75 humidity 70 720 < th dose independent rect. 12 7
483 225.78 humidity 50 720 > th dose dependent no NA NA
544 226.11 humidity 60 720 < th dose independent rect. 14 1
568 226.20 humidity 50 720 > th dose dependent sin 18 NA
580 226.33 humidity 70 1440 > th dose independent rect. 11 8
589 226.40 humidity 50 720 > th dose dependent rect. 13 23
590 226.40 humidity 50 720 > th dose dependent rect. 15 23
642 226.69 humidity 50 720 > th dose dependent rect. 11 23
720 227.09 radiation 10 720 < th dose dependent rect. 14 5
739 227.22 humidity 70 720 < th dose independent rect. 12 20
867 227.85 radiation 10 720 < th dose dependent rect. 24 19
896 228.11 humidity 50 10 > th dose dependent rect. 13 23
906 228.18 humidity 80 1440 < th dose independent rect. 8 7