Os06g0165300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0165300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.09 | 0.581 | 6.69 | 0.462 | 0.843 | -2.27 | -0.0901 | 0.473 | -0.395 | 12.8 | 8.833 | 287 | -- | -- |
| 153.25 | 0.577 | 6.7 | 0.394 | 0.83 | -2.25 | -0.0304 | -- | -0.414 | 12.8 | 12.28 | 290 | -- | -- |
| 153.12 | 0.576 | 6.7 | 0.451 | 0.841 | -2.27 | -- | 0.423 | -0.397 | 12.8 | 9.041 | 289 | -- | -- |
| 153.24 | 0.577 | 6.7 | 0.385 | 0.842 | -2.26 | -- | -- | -0.415 | 12.8 | 13.29 | 288 | -- | -- |
| 162.23 | 0.593 | 6.7 | 0.577 | -- | -2.27 | -- | 0.585 | -0.362 | -- | 4.883 | 749 | -- | -- |
| 207.07 | 0.675 | 6.77 | -0.107 | 0.776 | -- | 0.197 | -- | -0.738 | 9.62 | -- | -- | -- | -- |
| 207.21 | 0.674 | 6.77 | -0.0998 | 0.774 | -- | -- | -- | -0.737 | 9.66 | -- | -- | -- | -- |
| 162.51 | 0.594 | 6.71 | 0.471 | -- | -2.26 | -- | -- | -0.39 | -- | 12.28 | 752 | -- | -- |
| 156.75 | 0.583 | 6.72 | -- | 0.812 | -2.07 | -- | -- | -0.48 | 12.6 | 12.22 | 289 | -- | -- |
| 242.76 | 0.728 | 6.79 | -0.106 | -- | -- | -- | -- | -0.736 | -- | -- | -- | -- | -- |
| 207.47 | 0.674 | 6.76 | -- | 0.775 | -- | -- | -- | -0.726 | 9.67 | -- | -- | -- | -- |
| 167.75 | 0.603 | 6.73 | -- | -- | -2.08 | -- | -- | -0.465 | -- | 9.239 | 736 | -- | -- |
| 243.06 | 0.728 | 6.78 | -- | -- | -- | -- | -- | -0.724 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 6 | 152.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 7 | 152.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 9 | 152.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 10 | 152.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 11 | 152.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 12 | 152.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 14 | 153.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 15 | 153.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 19 | 153.16 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 28 | 153.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 42 | 153.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 53 | 153.88 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 88 | 154.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 109 | 154.85 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 112 | 154.86 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 124 | 154.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 129 | 155.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 144 | 155.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 155 | 155.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 158 | 155.32 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 173 | 155.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 183 | 155.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 187 | 155.60 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 202 | 155.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 203 | 155.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 204 | 155.69 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 205 | 155.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 8 |
| 237 | 155.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 242 | 155.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 265 | 155.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 298 | 156.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 316 | 156.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 425 | 156.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 434 | 156.56 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 458 | 156.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 477 | 156.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 6 |
| 487 | 156.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 530 | 156.76 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 595 | 156.90 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 648 | 157.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 662 | 157.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 691 | 157.09 | temperature | 10 | 4320 | > th | dose dependent | sin | 15 | NA |
| 740 | 157.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 815 | 157.28 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 864 | 157.38 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 888 | 157.41 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 3 |