Os06g0160800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0160800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.98 | 0.659 | 6.29 | -1.64 | 0.906 | -1.08 | 0.209 | -5.53 | -0.946 | 0.729 | 24.78 | 2280 | -- | -- |
| 206.2 | 0.669 | 6.13 | -0.423 | 0.87 | -1.58 | -0.234 | -- | -0.697 | 0.787 | 25.64 | 2293 | -- | -- |
| 197.06 | 0.654 | 6.29 | -1.62 | 0.896 | -1.08 | -- | -5.54 | -0.945 | 0.65 | 25 | 2242 | -- | -- |
| 205.04 | 0.667 | 6.13 | -0.268 | 0.928 | -1.6 | -- | -- | -0.653 | 0.575 | 25.6 | 2311 | -- | -- |
| 236.19 | 0.716 | 6.35 | -1.97 | -- | -0.762 | -- | -6.68 | -1.04 | -- | 23.44 | 4673 | -- | -- |
| 286.76 | 0.794 | 6.15 | -0.76 | 0.711 | -- | -0.184 | -- | -0.778 | 1.26 | -- | -- | -- | -- |
| 286.9 | 0.793 | 6.15 | -0.753 | 0.712 | -- | -- | -- | -0.777 | 1.3 | -- | -- | -- | -- |
| 245.46 | 0.73 | 6.12 | -0.282 | -- | -1.47 | -- | -- | -0.656 | -- | 25.84 | 1720 | -- | -- |
| 206.78 | 0.67 | 6.12 | -- | 0.936 | -1.67 | -- | -- | -0.611 | 0.534 | 25.49 | 2311 | -- | -- |
| 318.14 | 0.833 | 6.14 | -0.726 | -- | -- | -- | -- | -0.762 | -- | -- | -- | -- | -- |
| 301.86 | 0.813 | 6.13 | -- | 0.699 | -- | -- | -- | -0.693 | 1.26 | -- | -- | -- | -- |
| 247.37 | 0.733 | 6.11 | -- | -- | -1.52 | -- | -- | -0.604 | -- | 25.6 | 1718 | -- | -- |
| 332.03 | 0.851 | 6.12 | -- | -- | -- | -- | -- | -0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 188.50 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 18 |
| 6 | 189.24 | radiation | 40 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 7 | 189.26 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 24 | 189.26 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 19 |
| 25 | 189.39 | radiation | 40 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 28 | 189.47 | radiation | 40 | 1440 | > th | dose independent | sin | 11 | NA |
| 36 | 190.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 62 | 191.35 | radiation | 10 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 75 | 191.37 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 18 |
| 79 | 191.62 | radiation | 10 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 81 | 191.68 | radiation | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 88 | 192.13 | radiation | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 99 | 192.39 | radiation | 40 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 103 | 192.48 | radiation | 40 | 1440 | < th | dose independent | rect. | 19 | 15 |
| 110 | 192.63 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 112 | 192.66 | radiation | 10 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 113 | 192.66 | radiation | 10 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 116 | 192.70 | radiation | 40 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 123 | 192.76 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 135 | 192.79 | radiation | 20 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 156 | 192.85 | radiation | 40 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 157 | 192.85 | radiation | 10 | 4320 | < th | dose dependent | rect. | 22 | 13 |
| 210 | 193.15 | radiation | 10 | 4320 | < th | dose dependent | sin | 9 | NA |
| 256 | 193.84 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 272 | 193.98 | radiation | 40 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 274 | 194.02 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 296 | 194.07 | radiation | 40 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 306 | 194.10 | radiation | 10 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 316 | 194.19 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 317 | 194.19 | radiation | 40 | 1440 | < th | dose dependent | rect. | 21 | 13 |
| 340 | 194.27 | radiation | 40 | 1440 | < th | dose dependent | rect. | 24 | 10 |
| 362 | 194.39 | humidity | 70 | 1440 | < th | dose independent | sin | 8 | NA |
| 363 | 194.39 | radiation | 40 | 1440 | < th | dose dependent | sin | 11 | NA |
| 402 | 194.53 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 462 | 195.10 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 654 | 195.96 | radiation | 40 | 1440 | < th | dose independent | sin | 11 | NA |
| 714 | 196.27 | temperature | 25 | 1440 | > th | dose dependent | sin | 6 | NA |
| 716 | 196.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 736 | 196.41 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 824 | 196.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 6 |