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Os06g0158700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0171) R2 : 0.669
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.2 (0.042) R2dC : 0.59 R2C : 0.56
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.388 (0.036) R2dN8 : 0.109 R2N8 : 0.0792
σ : 0.323
deviance : 47.64
__
_____
C
peak time of C : 21.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.24 0.279 10.8 -0.639 1.19 -0.523 -0.215 1.21 0.16 21.5 19.4 4163 -- --
36.45 0.281 10.8 -0.408 1.17 -0.691 -0.212 -- 0.233 21.7 18.5 4169 -- --
34.98 0.275 10.8 -0.598 1.2 -0.526 -- 1.3 0.168 21.6 19.4 2948 -- --
35.6 0.278 10.8 -0.53 1.19 -0.926 -- -- 0.199 21.5 18.46 4090 -- --
115.04 0.5 10.8 -0.528 -- -0.7 -- 1.04 0.175 -- 19.2 2340 -- --
47.52 0.323 10.7 -0.0216 1.19 -- -0.174 -- 0.386 21.6 -- -- -- --
47.63 0.323 10.7 -0.0151 1.2 -- -- -- 0.387 21.6 -- -- -- --
115.46 0.5 10.7 -0.458 -- -1.07 -- -- 0.214 -- 18.4 2274 -- --
39.45 0.293 10.7 -- 1.2 -0.711 -- -- 0.309 21.5 18.1 2779 -- --
132.13 0.537 10.7 -0.00568 -- -- -- -- 0.384 -- -- -- -- --
47.64 0.323 10.7 -- 1.2 -- -- -- 0.388 21.6 -- -- -- --
116.74 0.503 10.7 -- -- -0.623 -- -- 0.239 -- 21.39 793 -- --
132.13 0.537 10.7 -- -- -- -- -- 0.385 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.01 humidity 50 43200 < th dose independent rect. 8 1
2 33.09 humidity 50 43200 > th dose independent rect. 8 1
3 33.64 humidity 60 43200 < th dose dependent rect. 8 1
4 33.72 humidity 80 43200 < th dose dependent rect. 8 1
5 33.81 radiation 30 43200 < th dose independent rect. 5 2
7 33.94 temperature 20 4320 < th dose independent rect. 19 4
10 33.96 radiation 10 4320 > th dose dependent rect. 17 15
13 33.99 temperature 20 4320 > th dose independent rect. 18 5
16 34.02 humidity 70 43200 > th dose independent rect. 1 14
17 34.03 humidity 70 43200 > th dose independent rect. 2 12
24 34.04 radiation 10 4320 > th dose dependent rect. 5 3
37 34.05 humidity 70 43200 > th dose independent rect. 3 9
41 34.06 humidity 70 43200 > th dose independent sin 4 NA
42 34.06 humidity 80 43200 < th dose independent rect. 6 3
49 34.07 radiation 30 43200 < th dose independent rect. 18 13
53 34.09 temperature 20 4320 < th dose independent rect. 21 1
55 34.09 humidity 70 43200 < th dose independent rect. 23 16
61 34.12 temperature 20 4320 > th dose independent rect. 21 1
72 34.13 humidity 70 43200 > th dose independent rect. 18 21
79 34.16 radiation 10 4320 < th dose independent rect. 5 1
101 34.20 humidity 70 43200 < th dose independent sin 5 NA
112 34.21 humidity 80 43200 > th dose independent rect. 5 4
141 34.25 radiation 20 43200 > th dose dependent rect. 6 1
174 34.29 radiation 30 43200 < th dose independent rect. 1 6
186 34.30 humidity 70 43200 > th dose independent rect. 8 19
200 34.31 humidity 70 43200 > th dose independent rect. 4 22
205 34.32 radiation 30 43200 < th dose independent rect. 20 11
226 34.33 humidity 70 43200 > th dose independent no NA NA
238 34.33 humidity 70 43200 > th dose independent rect. 22 23
249 34.34 wind 7 43200 > th dose dependent rect. 22 1
266 34.35 humidity 70 43200 > th dose independent rect. 13 23
290 34.37 humidity 80 43200 < th dose dependent rect. 11 1
300 34.38 humidity 70 43200 < th dose independent rect. 8 22
311 34.39 humidity 70 43200 < th dose independent rect. 9 20
319 34.40 wind 9 43200 < th dose independent rect. 22 1
322 34.40 radiation 30 4320 < th dose independent rect. 16 17
343 34.42 humidity 70 43200 < th dose independent no NA NA
345 34.42 radiation 10 4320 < th dose independent rect. 18 12
347 34.42 wind 7 43200 > th dose independent rect. 22 17
348 34.42 wind 7 43200 < th dose independent rect. 22 17
368 34.43 humidity 70 43200 < th dose independent rect. 3 23
372 34.43 humidity 50 43200 > th dose dependent rect. 8 1
376 34.44 humidity 70 43200 > th dose independent rect. 10 1
388 34.44 humidity 70 43200 < th dose independent rect. 14 23
390 34.44 humidity 60 43200 < th dose dependent rect. 13 1
394 34.45 wind 9 43200 > th dose independent rect. 22 1
410 34.46 radiation 30 43200 < th dose independent rect. 22 9
424 34.46 humidity 70 43200 < th dose independent rect. 24 23
444 34.47 wind 9 43200 > th dose dependent rect. 24 2
445 34.48 wind 7 43200 < th dose independent rect. 1 1
490 34.51 wind 7 43200 > th dose independent sin 5 NA
501 34.52 wind 7 43200 > th dose independent rect. 1 1
507 34.52 radiation 10 43200 < th dose independent rect. 17 13
515 34.53 wind 7 43200 < th dose independent sin 5 NA
521 34.53 radiation 30 4320 < th dose independent rect. 2 7
540 34.54 radiation 10 43200 < th dose independent rect. 22 8
541 34.54 radiation 10 43200 < th dose independent rect. 20 10
543 34.54 radiation 30 4320 < th dose independent rect. 21 12
557 34.55 radiation 30 4320 < th dose independent rect. 4 5
567 34.55 wind 7 43200 > th dose independent rect. 3 11
571 34.55 radiation 30 4320 < th dose independent rect. 19 14
584 34.56 radiation 30 4320 < th dose independent rect. 6 3
605 34.56 humidity 90 14400 > th dose dependent rect. 24 14
619 34.58 humidity 70 43200 < th dose independent rect. 10 2
620 34.58 wind 7 43200 < th dose independent rect. 4 10
630 34.59 humidity 70 43200 > th dose independent rect. 18 5
654 34.60 humidity 80 43200 < th dose dependent sin 3 NA
667 34.61 radiation 10 43200 < th dose dependent rect. 4 1
689 34.63 radiation 1 43200 > th dose independent rect. 8 7
690 34.63 radiation 1 43200 < th dose independent rect. 8 7
713 34.64 humidity 90 43200 < th dose independent rect. 12 1
725 34.64 wind 7 43200 > th dose dependent rect. 21 5
764 34.66 radiation 1 43200 < th dose dependent rect. 9 6
772 34.66 humidity 80 43200 < th dose dependent rect. 18 20
787 34.67 wind 1 43200 < th dose dependent rect. 10 16
824 34.69 wind 7 43200 > th dose dependent rect. 10 3
826 34.69 radiation 1 43200 < th dose dependent rect. 10 4
828 34.69 radiation 10 43200 < th dose dependent rect. 20 9
834 34.69 wind 7 43200 > th dose dependent rect. 21 18
837 34.70 humidity 70 43200 > th dose independent sin 17 NA
839 34.70 radiation 1 14400 > th dose independent rect. 10 1
842 34.70 wind 7 43200 > th dose independent rect. 21 5
880 34.71 humidity 80 43200 < th dose dependent rect. 8 17
888 34.72 humidity 90 43200 > th dose independent rect. 12 1
895 34.72 humidity 70 43200 < th dose independent rect. 18 5
920 34.73 humidity 70 43200 < th dose independent sin 16 NA
922 34.73 humidity 90 14400 > th dose independent rect. 23 1
931 34.73 radiation 10 4320 < th dose independent rect. 22 8
937 34.73 wind 1 43200 < th dose dependent rect. 11 1
939 34.73 wind 5 43200 > th dose dependent rect. 8 6
949 34.73 wind 5 43200 > th dose dependent rect. 23 16
963 34.74 radiation 1 14400 < th dose independent rect. 10 1
968 34.74 humidity 50 43200 > th dose independent rect. 8 7
971 34.74 humidity 50 43200 < th dose independent rect. 8 9
980 34.74 radiation 1 14400 < th dose dependent rect. 10 1