Os06g0158600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF652 family protein.
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Os06g0158600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF652 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.91 | 0.348 | 10 | -0.102 | 0.409 | 0.83 | 0.551 | 0.962 | -0.267 | 17.2 | 17.18 | 74 | -- | -- |
| 56.02 | 0.349 | 10 | -0.0979 | 0.421 | 0.729 | 0.64 | -- | -0.266 | 17 | 12.8 | 69 | -- | -- |
| 55.49 | 0.347 | 10 | -0.105 | 0.421 | 0.782 | -- | 1.04 | -0.26 | 16.7 | 17.43 | 70 | -- | -- |
| 57.13 | 0.352 | 10 | -0.0869 | 0.416 | 0.696 | -- | -- | -0.259 | 16.9 | 12.15 | 69 | -- | -- |
| 63.16 | 0.37 | 10 | -0.123 | -- | 0.863 | -- | 0.928 | -0.288 | -- | 7.15 | 127 | -- | -- |
| 63.52 | 0.374 | 10 | -0.0958 | 0.61 | -- | 0.429 | -- | -0.24 | 15.2 | -- | -- | -- | -- |
| 64.1 | 0.375 | 10 | -0.0873 | 0.611 | -- | -- | -- | -0.238 | 15.2 | -- | -- | -- | -- |
| 64.66 | 0.375 | 10 | -0.104 | -- | 0.81 | -- | -- | -0.285 | -- | 3.823 | 127 | -- | -- |
| 57.32 | 0.353 | 10 | -- | 0.423 | 0.693 | -- | -- | -0.249 | 16.8 | 13.21 | 69 | -- | -- |
| 85.32 | 0.432 | 10 | -0.113 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 64.3 | 0.375 | 10 | -- | 0.612 | -- | -- | -- | -0.228 | 15.2 | -- | -- | -- | -- |
| 64.94 | 0.375 | 10 | -- | -- | 0.811 | -- | -- | -0.273 | -- | 3.89 | 125 | -- | -- |
| 85.66 | 0.432 | 10 | -- | -- | -- | -- | -- | -0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.93 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 2 | 48.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 3 | 48.15 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 13 | 49.11 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 16 | 49.20 | temperature | 15.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 17 | 49.25 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 18 | 49.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 25 | 49.44 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 31 | 49.65 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 34 | 49.67 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 6 |
| 35 | 49.67 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 6 |
| 41 | 49.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 42 | 49.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 43 | 49.76 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 46 | 49.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 47 | 49.77 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 18 |
| 48 | 49.77 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 49 | 49.79 | radiation | 40.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 50 | 49.80 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 19 |
| 52 | 49.80 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 53 | 49.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 55 | 49.84 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 56 | 49.84 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 57 | 49.84 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 59 | 49.84 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 61 | 49.89 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 62 | 49.91 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 65 | 49.96 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 73 | 49.99 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 79 | 50.00 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 94 | 50.08 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 96 | 50.08 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 97 | 50.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 101 | 50.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 104 | 50.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 105 | 50.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 107 | 50.12 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 109 | 50.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 110 | 50.15 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 112 | 50.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 134 | 50.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 135 | 50.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 136 | 50.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 137 | 50.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 138 | 50.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 139 | 50.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 140 | 50.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 141 | 50.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 145 | 50.42 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 147 | 50.43 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 151 | 50.47 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 153 | 50.47 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 170 | 50.56 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 174 | 50.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 175 | 50.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 179 | 50.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 183 | 50.60 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 191 | 50.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 192 | 50.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 201 | 50.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 202 | 50.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 203 | 50.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 204 | 50.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 206 | 50.66 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 209 | 50.68 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 210 | 50.68 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 214 | 50.71 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 221 | 50.77 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 224 | 50.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 226 | 50.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 227 | 50.78 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 229 | 50.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 230 | 50.78 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 232 | 50.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 233 | 50.78 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 238 | 50.82 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 239 | 50.82 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 242 | 50.84 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 244 | 50.87 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 256 | 50.93 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 259 | 50.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 260 | 50.95 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 261 | 50.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 262 | 50.95 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 264 | 50.95 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 295 | 51.01 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 300 | 51.03 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 329 | 51.09 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 343 | 51.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 349 | 51.15 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 356 | 51.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 20 |
| 357 | 51.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 360 | 51.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 364 | 51.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 365 | 51.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 366 | 51.19 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 368 | 51.20 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 379 | 51.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 384 | 51.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 388 | 51.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 389 | 51.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 401 | 51.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 431 | 51.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 18 |
| 433 | 51.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 440 | 51.34 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 442 | 51.34 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 443 | 51.34 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 445 | 51.34 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 446 | 51.34 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 447 | 51.34 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 449 | 51.34 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 452 | 51.35 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 453 | 51.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 454 | 51.35 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 456 | 51.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 475 | 51.44 | radiation | 20.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 477 | 51.44 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 495 | 51.47 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 526 | 51.53 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 531 | 51.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 533 | 51.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 534 | 51.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 537 | 51.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 538 | 51.54 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 540 | 51.54 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 544 | 51.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 555 | 51.55 | radiation | 40.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 556 | 51.55 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 558 | 51.56 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 566 | 51.58 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 584 | 51.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 587 | 51.63 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 602 | 51.66 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 617 | 51.70 | radiation | 1.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 618 | 51.70 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 620 | 51.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 632 | 51.73 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 633 | 51.73 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 675 | 51.78 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 679 | 51.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 699 | 51.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 8 |
| 702 | 51.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 709 | 51.86 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 722 | 51.90 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 723 | 51.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 726 | 51.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 727 | 51.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 743 | 51.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 747 | 51.94 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 752 | 51.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 788 | 52.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 797 | 52.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 812 | 52.04 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 822 | 52.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 828 | 52.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 854 | 52.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 857 | 52.11 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 866 | 52.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 889 | 52.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 890 | 52.15 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 891 | 52.15 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 892 | 52.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 893 | 52.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 894 | 52.15 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 904 | 52.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 905 | 52.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 914 | 52.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 928 | 52.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 929 | 52.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 938 | 52.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 941 | 52.19 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 966 | 52.21 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 1000 | 52.25 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |