Os06g0155400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0155400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.94 | 0.564 | 9.76 | -1.84 | 3.27 | 1.38 | 2.46 | -0.782 | -0.274 | 7.13 | 82.57 | 1068 | -- | -- |
| 144.11 | 0.559 | 9.76 | -1.78 | 3.32 | 1.38 | 2.64 | -- | -0.281 | 7.17 | 85.56 | 1009 | -- | -- |
| 158.66 | 0.587 | 9.78 | -1.84 | 3.33 | 1.42 | -- | -1.67 | -0.302 | 7.11 | 84.96 | 1020 | -- | -- |
| 161.84 | 0.593 | 9.76 | -1.69 | 3.31 | 1.28 | -- | -- | -0.278 | 7.09 | 85.06 | 1036 | -- | -- |
| 659.29 | 1.2 | 9.85 | -1.72 | -- | 1.48 | -- | -1.13 | -0.264 | -- | 89 | 1339 | -- | -- |
| 176.86 | 0.623 | 9.77 | -1.58 | 3.13 | -- | 2.33 | -- | -0.298 | 6.75 | -- | -- | -- | -- |
| 190.54 | 0.646 | 9.77 | -1.54 | 3.14 | -- | -- | -- | -0.305 | 6.69 | -- | -- | -- | -- |
| 660.05 | 1.2 | 9.84 | -1.61 | -- | 1.35 | -- | -- | -0.249 | -- | 88.34 | 1344 | -- | -- |
| 232.94 | 0.711 | 9.74 | -- | 3.22 | 1.14 | -- | -- | -0.166 | 7.07 | 94 | 1065 | -- | -- |
| 703.62 | 1.24 | 9.84 | -1.47 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 253.12 | 0.744 | 9.73 | -- | 3.12 | -- | -- | -- | -0.134 | 6.72 | -- | -- | -- | -- |
| 727.64 | 1.26 | 9.81 | -- | -- | 1.19 | -- | -- | -0.12 | -- | 124.9 | 1337 | -- | -- |
| 760.47 | 1.29 | 9.8 | -- | -- | -- | -- | -- | -0.0798 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 5 | 144.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 53 | 147.53 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 55 | 147.55 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 61 | 147.93 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 64 | 148.04 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 68 | 148.21 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 93 | 149.11 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 97 | 149.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 100 | 149.24 | humidity | 90 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 103 | 149.32 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 110 | 149.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 11 |
| 112 | 149.49 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 13 |
| 124 | 149.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 125 | 149.59 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 11 |
| 143 | 149.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 184 | 150.03 | humidity | 90 | 720 | < th | dose dependent | sin | 17 | NA |
| 185 | 150.03 | humidity | 90 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 197 | 150.09 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 12 |
| 210 | 150.16 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 212 | 150.19 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 266 | 150.64 | humidity | 60 | 720 | > th | dose dependent | sin | 18 | NA |
| 268 | 150.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 12 |
| 297 | 150.79 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 324 | 150.92 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 417 | 151.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 452 | 151.37 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 6 |
| 454 | 151.37 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 505 | 151.53 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 528 | 151.60 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 530 | 151.61 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 537 | 151.64 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 4 |
| 572 | 151.73 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 642 | 151.90 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 11 |
| 691 | 152.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 709 | 152.04 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 713 | 152.05 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 766 | 152.13 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 811 | 152.27 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 22 |
| 812 | 152.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 842 | 152.36 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 892 | 152.48 | humidity | 80 | 720 | > th | dose independent | sin | 20 | NA |
| 900 | 152.50 | humidity | 80 | 720 | < th | dose independent | sin | 20 | NA |