Os06g0153100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os06g0153100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.38 | 0.449 | 7.03 | 0.0625 | 0.728 | 1.87 | 0.739 | 2.88 | -0.395 | 18.4 | 19.21 | 4464 | -- | -- |
| 92.89 | 0.452 | 6.97 | -0.112 | 0.763 | 0.724 | 0.752 | -- | -0.422 | 17.9 | 21.87 | 5993 | -- | -- |
| 92.11 | 0.447 | 7.03 | 0.136 | 0.752 | 2.07 | -- | 3.03 | -0.372 | 18.4 | 19.5 | 6019 | -- | -- |
| 94.27 | 0.455 | 6.97 | -0.119 | 0.767 | 0.718 | -- | -- | -0.42 | 17.9 | 21.87 | 5993 | -- | -- |
| 120.28 | 0.511 | 7.01 | 0.162 | -- | 2.28 | -- | 3.44 | -0.369 | -- | 19.39 | 5795 | -- | -- |
| 98.15 | 0.464 | 6.99 | -0.24 | 0.743 | -- | 0.713 | -- | -0.495 | 18.3 | -- | -- | -- | -- |
| 99.41 | 0.467 | 6.99 | -0.249 | 0.746 | -- | -- | -- | -0.492 | 18.3 | -- | -- | -- | -- |
| 122.72 | 0.516 | 6.94 | 0.113 | -- | 0.771 | -- | -- | -0.363 | -- | 21.38 | 5822 | -- | -- |
| 94.3 | 0.455 | 6.97 | -- | 0.771 | 0.766 | -- | -- | -0.398 | 17.9 | 22.18 | 6023 | -- | -- |
| 128.33 | 0.529 | 6.97 | -0.268 | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
| 101.04 | 0.47 | 6.98 | -- | 0.75 | -- | -- | -- | -0.465 | 18.3 | -- | -- | -- | -- |
| 122.89 | 0.516 | 6.95 | -- | -- | 0.649 | -- | -- | -0.379 | -- | 22.2 | 5808 | -- | -- |
| 130.23 | 0.533 | 6.97 | -- | -- | -- | -- | -- | -0.479 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.86 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 2 | 81.16 | wind | 1 | 30 | < th | dose dependent | rect. | 7 | 5 |
| 14 | 82.30 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 19 | 84.62 | wind | 1 | 30 | < th | dose dependent | rect. | 7 | 19 |
| 23 | 85.45 | wind | 1 | 30 | < th | dose independent | rect. | 7 | 4 |
| 34 | 86.33 | radiation | 30 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 114 | 88.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 115 | 88.54 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 116 | 88.63 | radiation | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 120 | 88.79 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 122 | 88.83 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 127 | 88.89 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 133 | 88.92 | radiation | 30 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 144 | 88.92 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 153 | 88.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 191 | 88.96 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 12 |
| 192 | 88.96 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 195 | 88.97 | humidity | 70 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 222 | 88.99 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 245 | 89.00 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 247 | 89.01 | radiation | 30 | 43200 | < th | dose independent | sin | 7 | NA |
| 275 | 89.02 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 281 | 89.02 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 284 | 89.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 289 | 89.03 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 320 | 89.04 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 389 | 89.06 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 425 | 89.08 | radiation | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 475 | 89.11 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 476 | 89.11 | wind | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 532 | 89.14 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 554 | 89.14 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 585 | 89.15 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 608 | 89.16 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 611 | 89.17 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 616 | 89.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 629 | 89.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 8 | 19 |
| 646 | 89.18 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 954 | 89.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |