Os06g0151900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphofructokinase family protein.
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Os06g0151900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphofructokinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.97 | 0.286 | 13.6 | -0.453 | 2.25 | 0.5 | 0.68 | 0.0732 | -0.255 | 6.01 | 20.5 | 200 | -- | -- |
| 36.99 | 0.283 | 13.6 | -0.465 | 2.25 | 0.494 | 0.655 | -- | -0.256 | 6.02 | 20.5 | 198 | -- | -- |
| 38.02 | 0.287 | 13.6 | -0.467 | 2.25 | 0.487 | -- | -0.0568 | -0.259 | 6.01 | 20.56 | 199 | -- | -- |
| 38.04 | 0.287 | 13.6 | -0.458 | 2.25 | 0.49 | -- | -- | -0.259 | 6.01 | 20.53 | 199 | -- | -- |
| 188.37 | 0.639 | 13.7 | -0.0593 | -- | -1.18 | -- | 0.846 | 0.232 | -- | 27.6 | 379 | -- | -- |
| 46 | 0.318 | 13.6 | -0.319 | 2.19 | -- | 0.594 | -- | -0.159 | 6.14 | -- | -- | -- | -- |
| 46.86 | 0.321 | 13.6 | -0.313 | 2.19 | -- | -- | -- | -0.161 | 6.14 | -- | -- | -- | -- |
| 171.38 | 0.61 | 13.6 | 0.122 | -- | -1.54 | -- | -- | 0.156 | -- | 27.6 | 412 | -- | -- |
| 43.13 | 0.308 | 13.6 | -- | 2.21 | 0.376 | -- | -- | -0.188 | 6 | 20.53 | 199 | -- | -- |
| 296.36 | 0.804 | 13.6 | -0.252 | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
| 49.45 | 0.329 | 13.6 | -- | 2.19 | -- | -- | -- | -0.126 | 6.15 | -- | -- | -- | -- |
| 171.43 | 0.61 | 13.6 | -- | -- | -1.53 | -- | -- | 0.124 | -- | 27.56 | 410 | -- | -- |
| 298.03 | 0.806 | 13.6 | -- | -- | -- | -- | -- | -0.0842 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.21 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 22 |
| 2 | 35.23 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 13 |
| 7 | 35.71 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 12 |
| 12 | 35.82 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 19 |
| 22 | 36.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 12 |
| 31 | 36.37 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 22 |
| 49 | 36.80 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 5 |
| 53 | 36.81 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 17 |
| 86 | 37.25 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 14 |
| 100 | 37.34 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 102 | 37.35 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 23 |
| 103 | 37.36 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 113 | 37.45 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 16 |
| 142 | 37.56 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 177 | 37.66 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 19 |
| 180 | 37.69 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 22 |
| 187 | 37.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 211 | 37.76 | temperature | 20 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 221 | 37.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 224 | 37.79 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 225 | 37.79 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 233 | 37.82 | temperature | 20 | 720 | > th | dose independent | sin | 16 | NA |
| 235 | 37.82 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 23 |
| 248 | 37.85 | temperature | 20 | 270 | < th | dose dependent | sin | 10 | NA |
| 251 | 37.85 | temperature | 20 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 258 | 37.87 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 23 |
| 271 | 37.90 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 1 |
| 306 | 37.95 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 15 |
| 317 | 37.96 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 327 | 37.97 | temperature | 20 | 270 | > th | dose independent | rect. | 8 | 23 |
| 349 | 37.99 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 23 |
| 374 | 38.02 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 23 |
| 396 | 38.04 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 426 | 38.08 | temperature | 20 | 30 | < th | dose independent | no | NA | NA |
| 434 | 38.08 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 435 | 38.08 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 23 |
| 438 | 38.08 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 439 | 38.08 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 23 |
| 441 | 38.09 | temperature | 20 | 30 | < th | dose independent | sin | 9 | NA |
| 442 | 38.09 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 7 |
| 446 | 38.09 | temperature | 20 | 30 | < th | dose independent | rect. | 7 | 23 |
| 454 | 38.10 | temperature | 20 | 720 | < th | dose independent | sin | 16 | NA |
| 461 | 38.10 | temperature | 20 | 90 | > th | dose independent | rect. | 10 | 23 |
| 470 | 38.11 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 471 | 38.11 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |
| 510 | 38.14 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 552 | 38.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 573 | 38.21 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 14 |
| 585 | 38.22 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 13 |
| 662 | 38.27 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 741 | 38.35 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 758 | 38.37 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 4 |
| 776 | 38.39 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 822 | 38.45 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 1 |
| 855 | 38.47 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 895 | 38.50 | temperature | 20 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 923 | 38.53 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 3 |
| 941 | 38.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 10 |
| 950 | 38.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 4 |