BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0151900 Os06g0151900|AK058759
(156 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56630.1 | chr5:22924311-22926728 FORWARD LENGTH=486 214 1e-56
AT4G26270.1 | chr4:13301094-13304030 REVERSE LENGTH=490 211 2e-55
AT4G29220.1 | chr4:14403621-14406071 REVERSE LENGTH=474 201 9e-53
AT5G61580.1 | chr5:24761150-24763827 FORWARD LENGTH=531 195 9e-51
AT4G32840.1 | chr4:15845010-15848305 REVERSE LENGTH=463 189 4e-49
AT5G47810.1 | chr5:19356569-19357989 REVERSE LENGTH=445 137 2e-33
AT2G22480.1 | chr2:9545670-9548414 FORWARD LENGTH=538 132 5e-32
>AT5G56630.1 | chr5:22924311-22926728 FORWARD LENGTH=486
Length = 485
Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 112/148 (75%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKIKTTINLKYIDPTYMIRAIPSNASDNVYCTLLAHS 60
DASGN +L DVGLWLSQ IK+HFKK K +NLKYIDPTYMIRA+PSNASDNVYCTLLA S
Sbjct: 336 DASGNKLLKDVGLWLSQSIKDHFKKNKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQS 395
Query: 61 VVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFLSKKD 120
VHGAMAGYTG+T G VNGR YIPFYRITE QN V ITDRMWARLLSSTNQPSFL KD
Sbjct: 396 AVHGAMAGYTGYTSGLVNGRQTYIPFYRITETQNNVVITDRMWARLLSSTNQPSFLGPKD 455
Query: 121 VEDAKMEEERASKFFDGPPPNPKVEDKV 148
+ K E DG P V +V
Sbjct: 456 TSEEKKELPETPLLDDGAVDIPPVTKEV 483
>AT4G26270.1 | chr4:13301094-13304030 REVERSE LENGTH=490
Length = 489
Score = 211 bits (536), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 112/146 (76%), Gaps = 7/146 (4%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKIKTTINLKYIDPTYMIRAIPSNASDNVYCTLLAHS 60
DASGN +L DVGLWLSQ IK+HF + K +NLKYIDPTYMIRA+PSNASDNVYCTLLA S
Sbjct: 337 DASGNKLLKDVGLWLSQSIKDHFNQKKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQS 396
Query: 61 VVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFLSKKD 120
VHGAMAGYTG+ G VNGR YIPFYRITEKQN V ITDRMWARLLSSTNQPSFL KD
Sbjct: 397 AVHGAMAGYTGYISGLVNGRQTYIPFYRITEKQNHVVITDRMWARLLSSTNQPSFLGPKD 456
Query: 121 VEDAK-------MEEERASKFFDGPP 139
V D K +++ + D PP
Sbjct: 457 VFDNKEKPMSALLDDGNCNGVVDVPP 482
>AT4G29220.1 | chr4:14403621-14406071 REVERSE LENGTH=474
Length = 473
Score = 201 bits (512), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKIKTTINLKYIDPTYMIRAIPSNASDNVYCTLLAHS 60
DASGN +L D+GLW+SQ+IK+HF K K T+ LKYIDPTYMIRA+PSNASDNV CTLLA S
Sbjct: 339 DASGNKLLQDIGLWISQRIKDHFAK-KMTLTLKYIDPTYMIRAVPSNASDNVCCTLLAQS 397
Query: 61 VVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFLSKKD 120
VHG MAGY GFTVG VNGRH YIPF RITEKQNKV ITDRMWARLLSSTNQPSF+ + D
Sbjct: 398 AVHGVMAGYNGFTVGLVNGRHTYIPFNRITEKQNKVVITDRMWARLLSSTNQPSFMKQAD 457
>AT5G61580.1 | chr5:24761150-24763827 FORWARD LENGTH=531
Length = 530
Score = 195 bits (495), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 109/134 (81%), Gaps = 5/134 (3%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKI-KTTINLKYIDPTYMIRAIPSNASDNVYCTLLAH 59
DASGN +LLDVGLWL+Q+IK+HF + K IN+KYIDPTYMIRAIPSNASDNVYCTLLA
Sbjct: 388 DASGNRLLLDVGLWLTQQIKDHFTNVRKMMINMKYIDPTYMIRAIPSNASDNVYCTLLAQ 447
Query: 60 SVVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFLSK- 118
S VHGAMAGY+GFTVG VN RH YIP ++TE N V +TDRMWARLL+STNQPSFL+
Sbjct: 448 SAVHGAMAGYSGFTVGPVNSRHAYIPISQVTEVTNTVKLTDRMWARLLASTNQPSFLTGE 507
Query: 119 ---KDVEDAKMEEE 129
++V D + +E+
Sbjct: 508 GALQNVIDMETQEK 521
>AT4G32840.1 | chr4:15845010-15848305 REVERSE LENGTH=463
Length = 462
Score = 189 bits (481), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/118 (77%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKIKTT-INLKYIDPTYMIRAIPSNASDNVYCTLLAH 59
DASGN +L DVGLW+S KIKE+F K I LKYIDPTYMIRAIP+NASDNVY TLLA
Sbjct: 335 DASGNKLLKDVGLWMSLKIKEYFAKHNVMDITLKYIDPTYMIRAIPANASDNVYSTLLAQ 394
Query: 60 SVVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFLS 117
S VHGAMAGYTGF G VNGRH YIPF RITE+QNKV ITDRMWAR+LSSTNQPSF++
Sbjct: 395 SAVHGAMAGYTGFVSGLVNGRHTYIPFNRITERQNKVVITDRMWARMLSSTNQPSFMN 452
>AT5G47810.1 | chr5:19356569-19357989 REVERSE LENGTH=445
Length = 444
Score = 137 bits (345), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 8/120 (6%)
Query: 1 DASGNSILLDVGLWLSQKIK-----EHFKKIKTTINLKYIDPTYMIRAIPSNASDNVYCT 55
D SGN++ LDVG+W +K EH ++ T +KYIDPTYMIRA+P+NA+DN+YCT
Sbjct: 322 DESGNAVFLDVGVWFKSVLKAWWEREHPDELFT---VKYIDPTYMIRAVPANATDNLYCT 378
Query: 56 LLAHSVVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSF 115
LLAHS +HG MAGYTGF G +NG + YIP + + +N+V+ D WA + S TNQP F
Sbjct: 379 LLAHSAIHGVMAGYTGFVPGPINGNYAYIPLEEVAQTKNQVNTRDHKWAWVRSVTNQPDF 438
>AT2G22480.1 | chr2:9545670-9548414 FORWARD LENGTH=538
Length = 537
Score = 132 bits (333), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%)
Query: 1 DASGNSILLDVGLWLSQKIKEHFKKIKTTINLKYIDPTYMIRAIPSNASDNVYCTLLAHS 60
DASGN++L D G+++ Q+ K++FK+I T I++KYIDPTYMIRA+ +NASD + CT+L +
Sbjct: 422 DASGNAVLGDFGVYIQQETKKYFKEISTPIDVKYIDPTYMIRAVRANASDGILCTVLGQN 481
Query: 61 VVHGAMAGYTGFTVGQVNGRHCYIPFYRITEKQNKVSITDRMWARLLSSTNQPSFL 116
VHGA AGY+G TVG +N + Y+P + V RMW R L+ST QP F+
Sbjct: 482 AVHGAFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTSTGQPDFI 537
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,683,077
Number of extensions: 145086
Number of successful extensions: 435
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 431
Number of HSP's successfully gapped: 7
Length of query: 156
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 66
Effective length of database: 8,639,129
Effective search space: 570182514
Effective search space used: 570182514
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)