Os06g0150500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0150500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.88 | 0.481 | 9.88 | 0.419 | 3.53 | -1.96 | 0.844 | -1.01 | -0.427 | 21.7 | 2.157 | 299 | 16 | 8.59 |
| 105.71 | 0.479 | 9.89 | 0.344 | 3.58 | -2.04 | -0.103 | -- | -0.442 | 21.8 | 2.9 | 319 | 16 | 8.38 |
| 105.36 | 0.478 | 9.88 | 0.386 | 3.52 | -1.97 | -- | -0.331 | -0.435 | 21.7 | 2.773 | 313 | 15.9 | 8.5 |
| 105.7 | 0.479 | 9.89 | 0.354 | 3.56 | -2.02 | -- | -- | -0.447 | 21.7 | 2.843 | 320 | 16 | 8.3 |
| 144.19 | 0.559 | 9.77 | 0.543 | -- | -2.14 | -- | 0.229 | -0.414 | -- | 3.27 | 1109 | 17.6 | 8.95 |
| 167.26 | 0.606 | 9.83 | 0.449 | 2.12 | -- | 0.102 | -- | -0.343 | 20.3 | -- | -- | -- | -- |
| 167.29 | 0.606 | 9.83 | 0.446 | 2.12 | -- | -- | -- | -0.343 | 20.3 | -- | -- | -- | -- |
| 141.71 | 0.554 | 9.78 | 0.578 | -- | -2.28 | -- | -- | -0.416 | -- | 2.827 | 1129 | 17.4 | 8.95 |
| 108.99 | 0.486 | 9.89 | -- | 3.56 | -2.03 | -- | -- | -0.452 | 21.7 | 2.54 | 319 | 16 | 8.28 |
| 416.99 | 0.954 | 9.77 | 0.432 | -- | -- | -- | -- | -0.366 | -- | -- | -- | -- | -- |
| 172.54 | 0.614 | 9.84 | -- | 2.12 | -- | -- | -- | -0.393 | 20.3 | -- | -- | -- | -- |
| 145.56 | 0.562 | 9.79 | -- | -- | -2.42 | -- | -- | -0.503 | -- | 2.289 | 1117 | 17.3 | 9.12 |
| 421.91 | 0.959 | 9.78 | -- | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.86 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 2 | 106.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 4 | 107.69 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 8 | 108.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 10 | 109.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 19 | 109.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 27 | 110.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 30 | 110.67 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 46 | 111.67 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 66 | 112.32 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 68 | 112.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 82 | 113.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 83 | 113.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 107 | 113.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 118 | 114.31 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 129 | 114.72 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 141 | 114.89 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 146 | 114.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 147 | 114.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 149 | 114.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 150 | 115.00 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 152 | 115.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 153 | 115.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 157 | 115.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 172 | 115.76 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 178 | 115.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 187 | 116.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 189 | 116.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 199 | 116.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 208 | 116.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 210 | 116.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 213 | 116.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 214 | 116.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 215 | 116.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 22 |
| 216 | 116.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 225 | 116.81 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 229 | 116.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 238 | 117.02 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 239 | 117.08 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 6 |
| 244 | 117.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 245 | 117.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 246 | 117.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 250 | 117.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 251 | 117.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 254 | 117.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 261 | 117.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 275 | 117.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 276 | 117.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 278 | 117.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 313 | 117.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 319 | 117.97 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 327 | 118.19 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 373 | 118.66 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 374 | 118.66 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 378 | 118.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 383 | 118.77 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 386 | 118.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 414 | 118.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 415 | 118.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 444 | 119.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 449 | 119.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 476 | 119.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 21 |
| 477 | 119.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 18 |
| 479 | 119.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 18 |
| 487 | 119.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 495 | 119.89 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 498 | 119.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 499 | 119.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 500 | 119.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 502 | 119.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 527 | 120.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 529 | 120.13 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 531 | 120.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 532 | 120.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 558 | 120.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 591 | 120.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 595 | 120.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 7 |
| 596 | 120.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 615 | 120.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 637 | 120.85 | humidity | 70.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 638 | 120.85 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 641 | 120.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 645 | 120.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 647 | 120.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 648 | 120.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 650 | 120.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 652 | 120.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 662 | 120.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 6 |
| 663 | 120.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 667 | 121.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 728 | 121.23 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 754 | 121.29 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 817 | 121.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 875 | 121.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 886 | 122.01 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 892 | 122.03 | temperature | 25.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 907 | 122.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 909 | 122.12 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 18 |
| 930 | 122.29 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 9 |
| 939 | 122.36 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 997 | 122.64 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 18 |