Os06g0150200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0150200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.19 | 0.734 | 4.29 | 0.994 | 0.0675 | -2.98 | -1.5 | 1.19 | -0.236 | 18.3 | 21.18 | 1755 | -- | -- |
| 247.35 | 0.732 | 4.33 | 0.68 | 0.0662 | -3.04 | -1.29 | -- | -0.298 | 18.3 | 21.11 | 1755 | -- | -- |
| 249.65 | 0.736 | 4.29 | 1 | 0.0611 | -3 | -- | 1.15 | -0.235 | 20 | 21.2 | 1754 | -- | -- |
| 252.21 | 0.74 | 4.34 | 0.729 | 0.0812 | -3.1 | -- | -- | -0.303 | 19.6 | 21.1 | 1755 | -- | -- |
| 249.91 | 0.736 | 4.3 | 0.993 | -- | -3 | -- | 1.1 | -0.244 | -- | 21.2 | 1750 | -- | -- |
| 495.42 | 1.04 | 4.52 | -0.681 | 0.0193 | -- | -1.79 | -- | -1.13 | 18 | -- | -- | -- | -- |
| 503.23 | 1.05 | 4.52 | -0.665 | 0.0194 | -- | -- | -- | -1.14 | 22 | -- | -- | -- | -- |
| 252.51 | 0.74 | 4.34 | 0.725 | -- | -3.1 | -- | -- | -0.303 | -- | 21.2 | 1750 | -- | -- |
| 262.55 | 0.755 | 4.36 | -- | 0.0692 | -2.77 | -- | -- | -0.424 | 22.6 | 21.37 | 1527 | -- | -- |
| 503.26 | 1.05 | 4.52 | -0.665 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 514.89 | 1.06 | 4.51 | -- | 0.0213 | -- | -- | -- | -1.07 | 19.5 | -- | -- | -- | -- |
| 262.64 | 0.755 | 4.36 | -- | -- | -2.79 | -- | -- | -0.422 | -- | 21.39 | 1527 | -- | -- |
| 514.91 | 1.06 | 4.51 | -- | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 5 | 239.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 6 | 239.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 13 | 239.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 27 | 240.65 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 34 | 240.98 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 48 | 241.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 67 | 241.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 88 | 242.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 147 | 243.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 512 | 251.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 590 | 253.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 651 | 254.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 654 | 254.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 704 | 255.71 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 920 | 259.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |