Os06g0150100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0150100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22 | 0.22 | 9.19 | 0.00469 | 0.511 | -0.776 | -0.291 | -0.886 | 0.0122 | 3.02 | 25.2 | 1450 | -- | -- |
| 22.67 | 0.223 | 9.21 | -0.101 | 0.667 | -0.673 | -0.227 | -- | -0.00794 | 2.69 | 25.2 | 1450 | -- | -- |
| 22.27 | 0.22 | 9.19 | 0.00244 | 0.515 | -0.776 | -- | -0.853 | 0.0126 | 2.94 | 25.2 | 1501 | -- | -- |
| 22.61 | 0.223 | 9.21 | -0.0986 | 0.699 | -0.687 | -- | -- | -0.0191 | 2.68 | 26.07 | 1501 | -- | -- |
| 34.38 | 0.273 | 9.2 | -0.0337 | -- | -0.875 | -- | -0.676 | -0.0219 | -- | 27.1 | 1084 | -- | -- |
| 29.41 | 0.254 | 9.18 | 0.0561 | 0.536 | -- | -0.268 | -- | 0.127 | 3.03 | -- | -- | -- | -- |
| 29.64 | 0.255 | 9.18 | 0.062 | 0.535 | -- | -- | -- | 0.129 | 2.97 | -- | -- | -- | -- |
| 34.81 | 0.275 | 9.22 | -0.167 | -- | -0.836 | -- | -- | -0.036 | -- | 30.05 | 1113 | -- | -- |
| 22.84 | 0.224 | 9.21 | -- | 0.688 | -0.65 | -- | -- | -0.00106 | 2.69 | 26.07 | 1501 | -- | -- |
| 46.06 | 0.317 | 9.17 | 0.0848 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 29.74 | 0.255 | 9.18 | -- | 0.536 | -- | -- | -- | 0.122 | 2.97 | -- | -- | -- | -- |
| 35.48 | 0.277 | 9.22 | -- | -- | -0.784 | -- | -- | -0.0187 | -- | 29.98 | 1116 | -- | -- |
| 46.25 | 0.317 | 9.18 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 20.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 21 | 20.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 22 | 20.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 32 | 21.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 45 | 21.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 59 | 21.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 103 | 21.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 159 | 21.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 218 | 21.49 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 223 | 21.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 281 | 21.58 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 285 | 21.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 367 | 21.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 391 | 21.68 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 500 | 21.75 | temperature | 20 | 30 | > th | dose dependent | sin | 11 | NA |
| 719 | 21.89 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 853 | 21.95 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 886 | 21.97 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 973 | 22.02 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |