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Os06g0149900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cysteine synthase (EC 4.2.99.8).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.02) R2 : 0.0325
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.165 (0.0421) R2dN8 : 0.042 R2N8 : 0.0325
σ : 0.376
deviance : 65.04
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.21 0.298 12.6 0.128 0.395 -0.761 -0.538 -1.86 0.226 21.5 9.444 109 -- --
42.73 0.304 12.5 0.402 0.415 -0.834 -0.372 -- 0.299 21.3 10.15 145 -- --
41.02 0.298 12.6 0.184 0.426 -0.757 -- -1.59 0.234 21.7 9.254 165 -- --
42.57 0.304 12.5 0.39 0.417 -0.659 -- -- 0.299 21.6 18.7 146 -- --
48.15 0.325 12.5 0.264 -- -0.833 -- -1.07 0.277 -- 17.1 13 -- --
49.03 0.328 12.6 0.246 0.476 -- -0.0313 -- 0.188 23.6 -- -- -- --
49.03 0.328 12.5 0.247 0.476 -- -- -- 0.188 23.6 -- -- -- --
49.22 0.328 12.5 0.421 -- -0.802 -- -- 0.323 -- 18.7 146 -- --
46.37 0.317 12.5 -- 0.416 -0.506 -- -- 0.237 22.2 19.5 145 -- --
63.26 0.372 12.5 0.26 -- -- -- -- 0.194 -- -- -- -- --
50.64 0.333 12.6 -- 0.478 -- -- -- 0.161 23.7 -- -- -- --
53.69 0.341 12.5 -- -- -0.704 -- -- 0.262 -- 18.9 4 -- --
65.04 0.376 12.5 -- -- -- -- -- 0.165 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.34 temperature 30 90 < th dose dependent rect. 19 22
2 39.46 temperature 15 90 > th dose dependent rect. 7 23
4 39.63 temperature 30 10 < th dose dependent rect. 19 23
5 39.65 temperature 15 10 > th dose dependent rect. 7 23
10 39.79 temperature 30 30 < th dose dependent rect. 23 23
14 39.96 temperature 30 90 < th dose dependent rect. 5 23
26 40.16 temperature 30 720 < th dose dependent rect. 19 3
29 40.22 temperature 15 90 > th dose dependent rect. 2 23
30 40.23 temperature 10 90 > th dose dependent no NA NA
35 40.27 temperature 15 10 > th dose dependent rect. 13 23
37 40.28 temperature 30 90 < th dose dependent rect. 9 23
39 40.30 temperature 10 270 > th dose dependent rect. 24 23
40 40.32 temperature 10 10 > th dose dependent no NA NA
51 40.39 temperature 30 90 < th dose dependent no NA NA
57 40.40 temperature 15 90 > th dose dependent rect. 21 23
64 40.45 temperature 30 90 < th dose dependent rect. 15 23
67 40.46 temperature 30 90 < th dose dependent rect. 13 23
73 40.49 temperature 30 10 < th dose dependent rect. 11 23
76 40.51 temperature 30 10 < th dose dependent rect. 13 23
78 40.52 temperature 30 10 < th dose dependent no NA NA
80 40.52 temperature 30 10 < th dose dependent rect. 15 23
88 40.54 temperature 20 10 > th dose dependent rect. 22 23
91 40.55 temperature 15 10 > th dose dependent rect. 3 23
100 40.56 temperature 30 30 < th dose dependent rect. 1 23
105 40.58 temperature 20 90 > th dose dependent rect. 2 21
121 40.61 temperature 30 10 < th dose dependent rect. 17 23
131 40.64 temperature 20 90 > th dose dependent rect. 15 23
161 40.70 temperature 20 10 > th dose dependent rect. 24 23
167 40.72 temperature 30 90 < th dose dependent rect. 19 16
229 40.86 temperature 30 30 < th dose dependent rect. 3 23
252 40.91 temperature 30 90 < th dose dependent rect. 19 14
259 40.92 temperature 30 720 < th dose dependent sin 16 NA
361 41.06 temperature 30 720 < th dose dependent rect. 10 17
374 41.07 temperature 20 10 > th dose dependent rect. 15 23
434 41.15 temperature 15 90 > th dose dependent rect. 3 16
437 41.15 temperature 20 10 > th dose dependent rect. 3 18
476 41.19 temperature 30 10 < th dose dependent rect. 19 15
522 41.24 wind 1 14400 > th dose independent rect. 20 3
552 41.25 temperature 20 270 > th dose dependent rect. 18 23
564 41.26 temperature 20 10 > th dose dependent rect. 17 23
627 41.32 temperature 30 90 < th dose dependent rect. 23 18
651 41.35 temperature 10 720 > th dose dependent rect. 7 18
716 41.42 temperature 10 720 > th dose dependent rect. 7 16
720 41.43 temperature 25 720 > th dose independent rect. 5 19
744 41.45 temperature 30 1440 < th dose dependent rect. 7 1
780 41.48 temperature 15 1440 > th dose dependent rect. 7 1
836 41.49 temperature 20 1440 > th dose dependent rect. 13 22
879 41.51 temperature 20 1440 > th dose dependent rect. 18 3
880 41.51 temperature 30 1440 < th dose dependent rect. 6 4
894 41.51 temperature 20 1440 > th dose dependent rect. 16 22
910 41.52 temperature 20 1440 > th dose dependent rect. 16 6
912 41.52 temperature 30 720 < th dose dependent rect. 15 10
947 41.53 temperature 20 1440 > th dose dependent no NA NA
986 41.54 temperature 20 1440 > th dose dependent rect. 6 3
987 41.54 temperature 20 1440 > th dose dependent rect. 5 5
988 41.54 temperature 20 1440 > th dose dependent rect. 15 8