BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0149900 Os06g0149900|AK072457
(347 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434 310 6e-85
AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324 310 9e-85
AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323 306 7e-84
AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325 305 2e-83
AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393 303 6e-83
AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306 290 9e-79
AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324 289 2e-78
AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369 285 3e-77
AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405 263 1e-70
AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422 81 7e-16
>AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434
Length = 433
Score = 310 bits (795), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 208/317 (65%), Gaps = 2/317 (0%)
Query: 29 HIASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKG 88
+IA +++QLIG TP+V L IA G A I K+E +P CSVKDR M+ DAE+KG
Sbjct: 112 NIADNVSQLIGKTPMVYLNSIA--KGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKG 169
Query: 89 LITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDP 148
I+PG + LVEPTSGN +GYR + MP S ++++LLK GAEL L+DP
Sbjct: 170 FISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229
Query: 149 TLGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXX 208
G G V K E++ K P+ ++L QF NPAN + H TGPEIW DT GKVDIF
Sbjct: 230 AKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIG 289
Query: 209 XXXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVID 268
+++K +NP ++I VEP ES ++SGG+PG HKIQGIG G IP LD ++D
Sbjct: 290 TGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMD 349
Query: 269 EVVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGER 328
EV+ ++++EA+ A++LA++EGL++GISSGA AA +KVA R EN GK+I +FPS GER
Sbjct: 350 EVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGER 409
Query: 329 YMNSDLFAAVREECNAM 345
Y+++ LF ++REE M
Sbjct: 410 YLSTPLFQSIREEVEKM 426
>AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324
Length = 323
Score = 310 bits (793), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 213/312 (68%), Gaps = 2/312 (0%)
Query: 30 IASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGL 89
I +DIT+LIG TP+V L + DG ARI K+E +P SVKDR A MI+DAE+KGL
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 90 ITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDPT 149
ITPG +TL+EPT+GN +GY+ + VMP S +++I+L+ +GAEL LSD
Sbjct: 65 ITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQR 124
Query: 150 LGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXX 209
+G +G+++K E + + P ++ QF NPAN E H R TGPEIW+D+AGKVDI
Sbjct: 125 IGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGT 184
Query: 210 XXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVIDE 269
K+LK QN +K+ VEP ESPV+SGG+PG H IQGIG G++P LD +++DE
Sbjct: 185 GGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLTIVDE 244
Query: 270 VVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERY 329
++ V +EA+ A+ LA++EGLL+GISSGA AA LKVA R EN GK+IV +FPSGGERY
Sbjct: 245 IIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSGGERY 304
Query: 330 MNSDLFAAVREE 341
+++ LF ++R E
Sbjct: 305 LSTKLFDSIRYE 316
>AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323
Length = 322
Score = 306 bits (785), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 158/319 (49%), Positives = 207/319 (64%), Gaps = 2/319 (0%)
Query: 29 HIASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKG 88
IA D+T+LIG TPLV L +A +G R+ K+E +P SVKDR MI DAE+KG
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61
Query: 89 LITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDP 148
LI PG + L+EPTSGN KGY+ + MP S +++I+L G EL L+DP
Sbjct: 62 LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121
Query: 149 TLGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXX 208
G +G + K E++ + PN ++L QF NPAN + H TGPEIWK T GK+D F
Sbjct: 122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIG 181
Query: 209 XXXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVID 268
KYLK QN VK+ VEP ES ++SGG+PG HKIQGIG G IP +L+ +ID
Sbjct: 182 TGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLID 241
Query: 269 EVVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGER 328
EVV V++DE++ AR+LA++EGLL+GISSGA AA +K+A R EN GK+ V +FPS GER
Sbjct: 242 EVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGER 301
Query: 329 YMNSDLFAAVREECNAMTF 347
Y+++ LF A R+E AMTF
Sbjct: 302 YLSTVLFDATRKEAEAMTF 320
>AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325
Length = 324
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/316 (50%), Positives = 211/316 (66%), Gaps = 2/316 (0%)
Query: 30 IASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGL 89
I D TQLIG TP+V L I DG ARI K+E +P SVK+R A MI+DAE+KGL
Sbjct: 8 IKDDATQLIGNTPMVYLNNIV--DGCVARIAAKLEMMEPCSSVKERIAYGMIKDAEDKGL 65
Query: 90 ITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDPT 149
ITPG +TL+E TSGN KGY+ V MP S +++I+L +GAE+ L+DP+
Sbjct: 66 ITPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLTDPS 125
Query: 150 LGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXX 209
G QG++DK E++ + P+ +L QF NP+N + H R TGPEIW+D+AG+VDI
Sbjct: 126 KGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAGVGT 185
Query: 210 XXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVIDE 269
++LK +N K+ VEP ES VISGG+PG H IQGIG GLIPD LD +V+DE
Sbjct: 186 GGTLSGSGRFLKEKNKDFKVYGVEPTESAVISGGKPGTHLIQGIGAGLIPDNLDFNVLDE 245
Query: 270 VVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERY 329
V+ V + EA+ A+ LA++EGLL+GISSGA AA +KVA R EN GK+IV +FPSGGERY
Sbjct: 246 VIQVTSVEAIETAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSGGERY 305
Query: 330 MNSDLFAAVREECNAM 345
+++ LF +VR E +
Sbjct: 306 LSTSLFESVRHEAENL 321
>AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393
Length = 392
Score = 303 bits (777), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/317 (46%), Positives = 207/317 (65%), Gaps = 2/317 (0%)
Query: 29 HIASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKG 88
+IA + QLIG TP+V L + G A + K+E +P CSVKDR MI DAEEKG
Sbjct: 74 NIADNAAQLIGKTPMVYLNNVV--KGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKG 131
Query: 89 LITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDP 148
LITPG + LVE TSGN KGY+ + MP S ++++LL+ GAEL L++P
Sbjct: 132 LITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEP 191
Query: 149 TLGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXX 208
G G + K E++ K+ PN ++L QF NPAN + H TGPEIW+DT GK+DI
Sbjct: 192 AKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIG 251
Query: 209 XXXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVID 268
+++K + P +K+I VEP ES ++SGG+PG HKIQGIG G +P LD +++D
Sbjct: 252 TGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVD 311
Query: 269 EVVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGER 328
E + ++++EA+ +++LA++EGLL+GISSGA AA ++VA R EN GK+I +FPS GER
Sbjct: 312 EYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGER 371
Query: 329 YMNSDLFAAVREECNAM 345
Y+++ LF ++REEC M
Sbjct: 372 YLSTQLFQSIREECEQM 388
>AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306
Length = 305
Score = 290 bits (741), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 156/318 (49%), Positives = 200/318 (62%), Gaps = 22/318 (6%)
Query: 30 IASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGL 89
IA D+T+LIG TPLV L ++A KD + + K+E +P SVKDR MI DAE KGL
Sbjct: 8 IAKDVTELIGNTPLVYLNKVA-KDCV-GHVAAKLEMMEPCSSVKDRIGYSMIADAEAKGL 65
Query: 90 ITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDPT 149
I PG + L+EPTSGN KGY+ V MP S +++I+L GAEL L+DP
Sbjct: 66 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLVITMPASMSIERRIILLAFGAELILTDPA 125
Query: 150 LGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXX 209
G +G V K E++ + PN ++L QF NPAN + H TGPEIWK
Sbjct: 126 KGMKGAVAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGAG------------ 173
Query: 210 XXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVIDE 269
KYLK QN +K+ VEP ESP++SGG+PG HKIQGIG G IP +LD +IDE
Sbjct: 174 --------KYLKEQNTNIKLYGVEPVESPILSGGKPGPHKIQGIGAGFIPGILDVDLIDE 225
Query: 270 VVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERY 329
VV V+++E++ AR LA EEGLL+GISSGA A +K+A R EN GK+IV +FPS GERY
Sbjct: 226 VVQVSSEESIDMARLLAREEGLLVGISSGAAATAAIKLAKRPENAGKLIVAVFPSFGERY 285
Query: 330 MNSDLFAAVREECNAMTF 347
+++ LF A R+E MTF
Sbjct: 286 LSTVLFDAARKEAETMTF 303
>AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324
Length = 323
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 214/316 (67%), Gaps = 2/316 (0%)
Query: 30 IASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGL 89
I +D+T+LIG TP+V L +I DG ARI K+E +P S+KDR A MI+DAE+KGL
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 90 ITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDPT 149
ITPG +TL+E T GN +GY+ + +MP S +++I+L+ +GAE+ L+D +
Sbjct: 65 ITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDIS 124
Query: 150 LGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXX 209
+G +G ++K +++ + P ++ +QF NP N E H R TGPEIW+D+AGKVDI
Sbjct: 125 IGIKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGVGT 184
Query: 210 XXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVIDE 269
K+LK +N +K+ VEP+ES V+SGG+PG H IQGIG G IP LD S++DE
Sbjct: 185 GGTVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGKPGPHLIQGIGSGEIPANLDLSIVDE 244
Query: 270 VVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERY 329
++ V +EA+ + LA++EGLL+GISSGA+ AA LKVA R EN GK+IV +FPSGGERY
Sbjct: 245 IIQVTGEEAIETTKLLAIKEGLLVGISSGASAAAALKVAKRPENVGKLIVVIFPSGGERY 304
Query: 330 MNSDLFAAVREECNAM 345
++++LF +VR E +
Sbjct: 305 LSTELFESVRYEAENL 320
>AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369
Length = 368
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 198/313 (63%), Gaps = 2/313 (0%)
Query: 33 DITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGLITP 92
D + LIG TPLV L ++ +G +A + K E +QP CS+KDR A+ MI DAE+K LI P
Sbjct: 52 DASLLIGKTPLVFLNKVT--EGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIP 109
Query: 93 GVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDPTLGF 152
G TTL+EPTSGN KGYR + MP S ++++ ++ GAEL L+DP G
Sbjct: 110 GKTTLIEPTSGNMGISLAFMAAMKGYRIIMTMPSYTSLERRVTMRSFGAELVLTDPAKGM 169
Query: 153 QGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXXXXX 212
G V K L P+ + QF+NPAN + H TGPEIW+DT G VDIF
Sbjct: 170 GGTVKKAYDLLDSTPDAFMCQQFANPANTQIHFDTTGPEIWEDTLGNVDIFVMGIGSGGT 229
Query: 213 XXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVIDEVVT 272
+YLK +NP VKI VEPAES +++GG+PG H I G G G P++LD V++ V+
Sbjct: 230 VSGVGRYLKSKNPNVKIYGVEPAESNILNGGKPGPHAITGNGVGFKPEILDMDVMESVLE 289
Query: 273 VNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERYMNS 332
V++++A+ AR LA++EGL++GISSGAN A +++A ENKGK+IVT+ S GERY++S
Sbjct: 290 VSSEDAIKMARELALKEGLMVGISSGANTVAAIRLAKMPENKGKLIVTIHASFGERYLSS 349
Query: 333 DLFAAVREECNAM 345
LF +R+E M
Sbjct: 350 VLFDELRKEAEEM 362
>AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405
Length = 404
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 191/319 (59%), Gaps = 12/319 (3%)
Query: 29 HIASDITQLIGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKG 88
+IA D+TQLIG TP+V L R+ DG A I K+E+ +P SVKDR L MI +AE G
Sbjct: 98 NIAEDVTQLIGSTPMVYLNRVT--DGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSG 155
Query: 89 LITPGVTTLVEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAELFLSDP 148
ITP T LVEPT+GN KGY+ + MP + ++++LL+ +GAE+ L++P
Sbjct: 156 AITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNP 215
Query: 149 TLGFQGLVDKVEQLKKELPNVHVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFXXXXX 208
G +G VDK +++ + N ++ QF N AN + H TGPEIW+DT G VDIF
Sbjct: 216 EKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIG 275
Query: 209 XXXXXXXXXKYLKLQNPAVKIICVEPAESPVISGGEPGKHKIQGIGPGLIPDMLDTSVID 268
+LK+ N +K++ VEP+E VISG PG +P +LD ++D
Sbjct: 276 TGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDN----------PGYLPGILDVKLLD 325
Query: 269 EVVTVNTDEAMVNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGER 328
EV V+ EA+ ARRLA+EEGLL+GISSGA A + +A R EN GK+I +FPS GER
Sbjct: 326 EVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGER 385
Query: 329 YMNSDLFAAVREECNAMTF 347
Y+ + LF+++ E M +
Sbjct: 386 YITTALFSSINREVQEMRY 404
>AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422
Length = 421
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 143/352 (40%), Gaps = 62/352 (17%)
Query: 38 IGWTPLVELKRIASKDGIDARIVGKVEAYQPLCSVKDRSALRMIEDAEEKGLITPGVTTL 97
IG TPL+ + ++ G + I+GK E P SVKDR A+++I++A E G + PG +
Sbjct: 48 IGNTPLIRINSLSEATGCE--ILGKCEFLNPGGSVKDRVAVKIIQEALESGKLFPG-GIV 104
Query: 98 VEPTSGNXXXXXXXXXXRKGYRFVAVMPGQYSFDKQILLKYMGAEL-------------- 143
E ++G+ G + V+P + +K +++ +GA +
Sbjct: 105 TEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVSITHKDHY 164
Query: 144 -------------FLSDPTLGFQ--GLVDK------VEQLKK------ELPNVHVLNQFS 176
S LG + G+ + VE++K+ + +QF
Sbjct: 165 VNIARRRADEANELASKRRLGSETNGIHQEKTNGCTVEEVKEPSLFSDSVTGGFFADQFE 224
Query: 177 NPANQEAHMRLTGPEIWKDTAGKVDIFXXXXXXXXXXXXXXKYLKLQNPAVKIICVEPAE 236
N AN AH TGPEIW T G +D F ++L+ +N VK ++P
Sbjct: 225 NLANYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGTLAGVSRFLQDKNERVKCFLIDPPG 284
Query: 237 SPV---ISGG--------------EPGKHKIQGIGPGLIPDMLDTSVIDEVVTVNTDEAM 279
S + ++ G P +GIG + + +D EA+
Sbjct: 285 SGLYNKVTRGVMYTREEAEGRRLKNPFDTITEGIGINRLTKNFLMAKLDGGFRGTDKEAV 344
Query: 280 VNARRLAMEEGLLMGISSGANLAACLKVASREENKGKMIVTMFPSGGERYMN 331
+R L +GL +G SS N ++VA + G IVT+ G R+++
Sbjct: 345 EMSRFLLKNDGLFVGSSSAMNCVGAVRVA-QTLGPGHTIVTILCDSGMRHLS 395
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,368,684
Number of extensions: 242105
Number of successful extensions: 488
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 476
Number of HSP's successfully gapped: 11
Length of query: 347
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 248
Effective length of database: 8,392,385
Effective search space: 2081311480
Effective search space used: 2081311480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)