Os06g0147100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0147100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 383.47 | 0.92 | 13.4 | 0.0177 | 2.86 | -3.84 | 1.06 | 0.876 | 0.757 | 21.7 | 25.19 | 585 | 0.222 | -- |
| 383.06 | 0.912 | 13.4 | 0.129 | 2.88 | -3.92 | 0.706 | -- | 0.801 | 21.7 | 25.1 | 559 | 5.68e-07 | -- |
| 385.68 | 0.915 | 13.4 | 0.0947 | 2.81 | -3.83 | -- | 0.247 | 0.744 | 21.7 | 25.31 | 565 | 0.0621 | -- |
| 384.46 | 0.913 | 13.4 | 0.114 | 2.88 | -3.88 | -- | -- | 0.792 | 21.8 | 25.1 | 539 | 2.51e-06 | -- |
| 404.49 | 0.937 | 13.3 | -0.0496 | -- | -5.95 | -- | 0.711 | 0.789 | -- | 37.74 | 559 | 0.565 | -- |
| 535.39 | 1.08 | 13.3 | 0.823 | 3.84 | -- | -0.203 | -- | 1.38 | 21.9 | -- | -- | -- | -- |
| 535.55 | 1.08 | 13.3 | 0.831 | 3.85 | -- | -- | -- | 1.38 | 21.9 | -- | -- | -- | -- |
| 401.31 | 0.933 | 13.3 | 0.186 | -- | -6.03 | -- | -- | 0.844 | -- | 36.96 | 530 | 0.165 | -- |
| 384.78 | 0.914 | 13.4 | -- | 2.87 | -3.94 | -- | -- | 0.783 | 21.8 | 25.1 | 539 | 1.95e-06 | -- |
| 1420.06 | 1.76 | 13.2 | 0.872 | -- | -- | -- | -- | 1.38 | -- | -- | -- | -- | -- |
| 553.74 | 1.1 | 13.3 | -- | 3.85 | -- | -- | -- | 1.28 | 21.9 | -- | -- | -- | -- |
| 401.57 | 0.933 | 13.3 | -- | -- | -6.07 | -- | -- | 0.837 | -- | 36.84 | 515 | 0.00385 | -- |
| 1440.12 | 1.77 | 13.2 | -- | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 379.18 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 3 | 382.08 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 7 | 383.73 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 7 |
| 10 | 384.57 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 10 |
| 17 | 386.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 39 | 388.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 41 | 388.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 42 | 388.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 46 | 389.13 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 5 |
| 48 | 389.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 61 | 390.15 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 63 | 390.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 66 | 390.60 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 76 | 391.45 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 111 | 393.75 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 173 | 396.26 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 219 | 398.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 246 | 399.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 268 | 400.70 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |
| 321 | 402.94 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 461 | 408.34 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 526 | 410.29 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 856 | 419.57 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 868 | 419.84 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 900 | 420.47 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 942 | 421.34 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |