Os06g0146800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0146800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 326.88 | 0.849 | 4.36 | -2.01 | 1.17 | -1.02 | -4.23 | -5.08 | -1.51 | 10.1 | 27.24 | 8 | -- | -- |
| 363.85 | 0.895 | 4.36 | -2 | 1.2 | -0.925 | 0.453 | -- | -1.5 | 10.6 | 20.52 | 3 | -- | -- |
| 348.27 | 0.869 | 4.36 | -2.06 | 1.46 | -0.983 | -- | -2.86 | -1.49 | 10.7 | 51.88 | 7 | -- | -- |
| 364.58 | 0.895 | 4.36 | -1.99 | 1.15 | -0.973 | -- | -- | -1.5 | 10.5 | 20.52 | 3 | -- | -- |
| 378.49 | 0.911 | 4.39 | -2.05 | -- | -1.75 | -- | -1.39 | -1.51 | -- | 18.62 | 3 | -- | -- |
| 381.54 | 0.916 | 4.35 | -1.97 | 2.09 | -- | 0.791 | -- | -1.5 | 11.2 | -- | -- | -- | -- |
| 384.14 | 0.918 | 4.34 | -1.94 | 2.09 | -- | -- | -- | -1.5 | 11.1 | -- | -- | -- | -- |
| 382.76 | 0.915 | 4.4 | -1.93 | -- | -1.68 | -- | -- | -1.52 | -- | 10.61 | 3 | -- | -- |
| 468 | 1.01 | 4.31 | -- | 1.27 | -0.859 | -- | -- | -1.28 | 10.7 | 20 | 3 | -- | -- |
| 656.05 | 1.2 | 4.4 | -1.99 | -- | -- | -- | -- | -1.51 | -- | -- | -- | -- | -- |
| 483.26 | 1.03 | 4.3 | -- | 2.11 | -- | -- | -- | -1.28 | 11.2 | -- | -- | -- | -- |
| 480.38 | 1.02 | 4.35 | -- | -- | -1.68 | -- | -- | -1.31 | -- | 10 | 3 | -- | -- |
| 760.34 | 1.29 | 4.35 | -- | -- | -- | -- | -- | -1.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.35 | radiation | 30.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 2 | 323.18 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 3 | 323.56 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 5 | 323.73 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 12 |
| 9 | 324.27 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 19 | 325.34 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 21 | 325.65 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 42 | 326.96 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 46 | 327.17 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 7 |
| 50 | 327.35 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 57 | 327.60 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 65 | 328.00 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 77 | 328.39 | radiation | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 78 | 328.41 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 90 | 328.99 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 91 | 329.13 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 101 | 329.43 | radiation | 10.0 | 90 | > th | dose independent | sin | 3 | NA |
| 122 | 329.85 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 134 | 330.31 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 161 | 330.93 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 178 | 331.02 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 186 | 331.22 | radiation | 20.0 | 10 | < th | dose independent | sin | 4 | NA |
| 193 | 331.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 208 | 331.69 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 337 | 333.36 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 349 | 333.60 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 354 | 333.65 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 377 | 333.93 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 20 |
| 388 | 334.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 390 | 334.09 | radiation | 10.0 | 90 | > th | dose independent | rect. | 15 | 23 |
| 398 | 334.23 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 401 | 334.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 410 | 334.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 446 | 334.71 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 450 | 334.74 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 468 | 334.83 | radiation | 20.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 469 | 334.83 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 493 | 335.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 500 | 335.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 505 | 335.21 | radiation | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 508 | 335.23 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 511 | 335.25 | radiation | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 582 | 335.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 583 | 335.64 | radiation | 20.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 584 | 335.64 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 601 | 335.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 627 | 335.90 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 23 |
| 630 | 335.93 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 649 | 336.10 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 657 | 336.16 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 669 | 336.22 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 679 | 336.29 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 696 | 336.35 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 707 | 336.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 715 | 336.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 718 | 336.46 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 737 | 336.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 739 | 336.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 783 | 336.71 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 864 | 336.72 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 866 | 336.74 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 9 |
| 872 | 336.75 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 877 | 336.77 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 889 | 336.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 898 | 336.85 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 933 | 336.89 | radiation | 1.0 | 10 | > th | dose dependent | no | NA | NA |