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Os06g0133800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Transferase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 16.8 (0.0132) R2 : 0.562
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.677 (0.0315) R2dC : 0.446 R2C : 0.404
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.313 (0.0278) R2dN8 : 0.157 R2N8 : 0.115
σ : 0.249
deviance : 28.44
__
_____
C
peak time of C : 23.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.18 0.216 16.8 -0.412 0.312 0.337 -0.333 0.716 -0.339 22.6 0.3017 114 -- --
21.69 0.217 16.8 -0.374 0.315 0.324 0.45 -- -0.331 23.3 0.3897 113 -- --
21.36 0.215 16.8 -0.418 0.312 0.345 -- 0.568 -0.345 22.5 6.203e-06 139 -- --
22.57 0.221 16.8 -0.376 0.316 0.33 -- -- -0.332 23 0.42 111 -- --
22.97 0.223 16.8 -0.366 -- 0.535 -- 0.434 -0.323 -- 0.483 74 -- --
22.85 0.224 16.8 -0.39 0.684 -- 0.521 -- -0.357 0.0217 -- -- -- --
24.02 0.23 16.8 -0.41 0.682 -- -- -- -0.359 23.9 -- -- -- --
24.02 0.228 16.8 -0.381 -- 0.534 -- -- -0.33 -- 1.27 64 -- --
26.39 0.239 16.8 -- 0.335 0.328 -- -- -0.295 22.8 0.00875 122 -- --
53.33 0.341 16.8 -0.389 -- -- -- -- -0.349 -- -- -- -- --
28.44 0.249 16.8 -- 0.677 -- -- -- -0.313 23.9 -- -- -- --
27.59 0.245 16.8 -- -- 0.538 -- -- -0.296 -- 0.2692 59 -- --
57.32 0.353 16.8 -- -- -- -- -- -0.306 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.23 temperature 20.0 30 > th dose dependent rect. 18 10
4 19.49 temperature 25.0 90 > th dose independent rect. 18 9
55 19.92 temperature 25.0 270 > th dose independent sin 14 NA
67 20.00 temperature 25.0 270 < th dose independent sin 13 NA
68 20.00 temperature 25.0 270 < th dose independent rect. 17 12
80 20.04 temperature 20.0 10 > th dose dependent rect. 18 7
84 20.06 temperature 25.0 90 > th dose independent rect. 20 7
105 20.14 temperature 20.0 30 > th dose dependent rect. 20 8
106 20.15 temperature 25.0 10 > th dose independent rect. 2 7
120 20.18 temperature 25.0 720 > th dose independent rect. 18 1
177 20.36 temperature 25.0 720 > th dose independent rect. 16 3
178 20.36 temperature 25.0 720 > th dose dependent rect. 18 1
181 20.37 humidity 90.0 10 < th dose independent rect. 2 7
186 20.37 temperature 25.0 270 > th dose dependent sin 12 NA
187 20.37 temperature 25.0 720 > th dose dependent rect. 16 3
219 20.42 temperature 20.0 30 > th dose dependent rect. 18 5
228 20.44 wind 7.0 270 < th dose independent rect. 17 10
230 20.44 precipitation 0.1 270 < th dose independent rect. 17 10
232 20.44 precipitation 0.1 270 < th dose dependent rect. 17 10
257 20.48 temperature 15.0 270 > th dose independent rect. 17 10
259 20.48 radiation 10.0 30 < th dose dependent sin 11 NA
260 20.48 atmosphere 1005.0 30 > th dose dependent rect. 3 6
266 20.49 radiation 10.0 270 < th dose independent rect. 17 10
275 20.50 precipitation 0.1 270 < th dose independent rect. 3 14
282 20.50 precipitation 0.1 270 < th dose dependent rect. 3 14
287 20.51 temperature 10.0 270 > th dose independent rect. 3 14
288 20.51 atmosphere 1015.0 270 < th dose independent rect. 3 14
293 20.51 radiation 40.0 270 < th dose dependent rect. 16 11
296 20.52 humidity 50.0 270 > th dose independent rect. 17 10
307 20.53 atmosphere 1005.0 270 > th dose dependent rect. 3 3
308 20.53 temperature 15.0 270 > th dose dependent rect. 3 4
320 20.54 atmosphere 1005.0 10 > th dose dependent rect. 6 3
324 20.55 atmosphere 995.0 270 > th dose independent rect. 17 10
326 20.55 atmosphere 995.0 270 > th dose independent rect. 3 14
338 20.57 radiation 1.0 90 < th dose independent sin 12 NA
351 20.58 atmosphere 1005.0 270 > th dose dependent rect. 4 1
360 20.59 wind 9.0 270 < th dose independent rect. 3 14
419 20.66 wind 1.0 270 > th dose independent rect. 3 4
461 20.70 temperature 10.0 720 > th dose dependent rect. 16 3
480 20.72 atmosphere 1015.0 270 < th dose independent rect. 7 20
483 20.72 wind 5.0 10 < th dose dependent rect. 6 3
499 20.74 wind 5.0 270 < th dose independent rect. 3 4
504 20.74 temperature 15.0 30 > th dose dependent rect. 5 4
518 20.76 wind 1.0 30 > th dose independent rect. 4 5
519 20.76 humidity 50.0 720 > th dose independent rect. 7 5
521 20.76 wind 1.0 30 > th dose independent rect. 9 14
526 20.76 wind 3.0 10 < th dose dependent rect. 6 1
527 20.76 humidity 80.0 10 > th dose dependent rect. 6 1
533 20.76 atmosphere 1005.0 30 > th dose dependent rect. 18 5
534 20.77 wind 3.0 10 < th dose independent rect. 6 3
535 20.77 humidity 90.0 10 < th dose independent rect. 6 3
538 20.77 atmosphere 1015.0 270 < th dose independent rect. 7 14
547 20.78 wind 1.0 30 > th dose independent rect. 23 10
562 20.79 radiation 40.0 30 < th dose independent rect. 23 10
573 20.80 radiation 10.0 270 < th dose independent rect. 3 4
575 20.80 wind 1.0 720 > th dose independent rect. 9 10
576 20.80 humidity 70.0 30 > th dose independent rect. 23 10
577 20.80 wind 9.0 720 < th dose independent rect. 24 19
578 20.80 wind 1.0 270 > th dose independent rect. 7 20
588 20.81 temperature 10.0 1440 > th dose independent rect. 24 10
591 20.81 atmosphere 995.0 1440 > th dose independent rect. 24 10
594 20.81 temperature 10.0 1440 > th dose independent rect. 10 14
609 20.82 wind 1.0 30 > th dose independent rect. 9 5
612 20.82 wind 7.0 30 < th dose independent rect. 23 10
616 20.82 radiation 1.0 30 > th dose independent rect. 12 21
628 20.83 wind 9.0 720 < th dose independent rect. 7 5
630 20.83 temperature 10.0 1440 > th dose independent rect. 5 5
633 20.83 atmosphere 995.0 1440 > th dose independent rect. 5 5
634 20.83 atmosphere 1015.0 1440 < th dose independent rect. 5 5
635 20.83 precipitation 0.1 720 < th dose independent rect. 7 5
640 20.83 wind 9.0 30 < th dose independent rect. 9 14
641 20.83 precipitation 0.1 30 < th dose independent rect. 9 14
642 20.83 temperature 10.0 1440 > th dose independent rect. 10 19
645 20.83 temperature 30.0 10 < th dose dependent rect. 6 1
646 20.83 radiation 10.0 10 < th dose dependent rect. 6 1
653 20.83 precipitation 0.1 720 < th dose dependent rect. 7 5
661 20.83 precipitation 0.1 30 < th dose dependent rect. 9 14
663 20.84 radiation 1.0 90 > th dose independent rect. 5 2
667 20.84 wind 9.0 720 < th dose independent rect. 19 5
668 20.84 humidity 60.0 720 > th dose independent rect. 19 5
675 20.84 temperature 10.0 30 > th dose independent rect. 23 10
676 20.84 temperature 25.0 720 < th dose independent rect. 14 10
677 20.84 temperature 30.0 30 < th dose independent rect. 23 10
678 20.84 humidity 50.0 30 > th dose independent rect. 23 10
680 20.84 atmosphere 995.0 30 > th dose independent rect. 23 10
686 20.84 temperature 10.0 30 > th dose independent rect. 9 14
689 20.84 atmosphere 1015.0 30 < th dose independent rect. 9 14
690 20.84 precipitation 0.1 270 < th dose independent rect. 7 14
693 20.84 precipitation 0.1 270 < th dose independent rect. 7 20
701 20.84 precipitation 0.1 270 < th dose dependent rect. 7 14
704 20.84 precipitation 0.1 270 < th dose dependent rect. 7 20
708 20.85 temperature 10.0 720 > th dose independent rect. 7 5
709 20.85 temperature 10.0 720 > th dose independent rect. 19 5
710 20.85 temperature 30.0 720 < th dose independent rect. 19 5
712 20.85 atmosphere 995.0 720 > th dose independent rect. 7 5
713 20.85 atmosphere 995.0 720 > th dose independent rect. 19 5
714 20.85 atmosphere 1015.0 720 < th dose independent rect. 7 5
715 20.85 radiation 1.0 720 < th dose independent rect. 19 5
724 20.85 radiation 20.0 270 < th dose independent rect. 21 10
726 20.85 wind 9.0 270 < th dose independent rect. 7 14
729 20.85 temperature 10.0 720 > th dose independent rect. 12 19
730 20.85 temperature 10.0 720 > th dose independent rect. 24 19
731 20.85 radiation 1.0 30 > th dose independent rect. 14 19
732 20.85 atmosphere 1005.0 90 > th dose dependent rect. 6 1
740 20.85 radiation 1.0 720 < th dose dependent rect. 19 5
749 20.86 humidity 70.0 270 > th dose independent rect. 3 4
750 20.86 precipitation 0.1 270 < th dose independent rect. 3 4
752 20.86 wind 9.0 270 < th dose independent rect. 7 20
753 20.86 precipitation 0.1 270 < th dose dependent rect. 3 4
761 20.87 temperature 10.0 270 > th dose independent rect. 3 4
763 20.87 temperature 30.0 270 < th dose independent rect. 3 4
764 20.87 humidity 50.0 270 > th dose independent rect. 3 4
767 20.87 atmosphere 995.0 270 > th dose independent rect. 3 4
768 20.87 atmosphere 1015.0 270 < th dose independent rect. 3 4
777 20.87 humidity 70.0 270 > th dose independent rect. 21 10
779 20.87 humidity 50.0 30 > th dose independent rect. 9 14
780 20.87 temperature 10.0 270 > th dose independent rect. 7 20
790 20.87 radiation 1.0 90 > th dose dependent rect. 18 13
797 20.88 precipitation 0.1 30 < th dose independent rect. 23 10
798 20.88 humidity 50.0 270 > th dose independent rect. 22 14
799 20.88 atmosphere 1015.0 10 < th dose independent rect. 9 21
800 20.88 radiation 1.0 90 > th dose dependent rect. 5 2
819 20.88 precipitation 0.1 30 < th dose dependent rect. 23 10
823 20.89 radiation 20.0 90 < th dose independent rect. 5 4
825 20.89 wind 1.0 10 > th dose independent rect. 1 8
828 20.89 wind 9.0 270 < th dose independent rect. 21 10
831 20.89 temperature 10.0 270 > th dose independent rect. 21 10
835 20.89 humidity 50.0 270 > th dose independent rect. 21 10
840 20.89 humidity 50.0 1440 > th dose independent rect. 24 10
841 20.89 atmosphere 995.0 270 > th dose independent rect. 21 10
843 20.89 atmosphere 1015.0 270 < th dose independent rect. 17 10
845 20.89 temperature 10.0 270 > th dose independent rect. 7 14
853 20.89 atmosphere 1005.0 10 > th dose dependent rect. 6 1
857 20.89 temperature 20.0 10 > th dose dependent rect. 20 5
881 20.90 precipitation 0.1 270 < th dose independent rect. 21 10
889 20.90 radiation 40.0 270 < th dose dependent rect. 3 4
892 20.90 precipitation 0.1 270 < th dose dependent rect. 21 10
918 20.92 humidity 70.0 10 > th dose independent rect. 6 3
920 20.92 humidity 50.0 30 > th dose independent rect. 9 5
921 20.92 radiation 1.0 720 > th dose independent rect. 7 5
930 20.92 wind 1.0 270 > th dose independent rect. 16 11
952 20.92 radiation 1.0 90 < th dose dependent rect. 20 23
953 20.93 radiation 30.0 10 < th dose independent rect. 6 3
967 20.93 wind 9.0 720 < th dose independent rect. 19 14
976 20.93 radiation 40.0 10 < th dose dependent rect. 6 3
983 20.94 humidity 70.0 90 > th dose independent rect. 5 4
991 20.94 temperature 10.0 720 > th dose independent rect. 9 10
992 20.94 atmosphere 1015.0 720 < th dose independent rect. 9 10
993 20.94 temperature 10.0 720 > th dose independent rect. 19 14
994 20.94 humidity 50.0 720 > th dose independent rect. 19 14
995 20.94 atmosphere 995.0 720 > th dose independent rect. 19 14
996 20.94 atmosphere 1015.0 270 < th dose independent rect. 22 14
997 20.94 precipitation 0.1 720 < th dose independent rect. 24 19