Os06g0133400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0133400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.2 | 0.556 | 10.1 | -0.0925 | 0.364 | 0.665 | 0.561 | -0.501 | -0.16 | 12.1 | 23.28 | 3530 | -- | -- |
| 140.32 | 0.552 | 10.1 | 0.0272 | 0.358 | 0.621 | 0.602 | -- | -0.149 | 12.1 | 22.52 | 3532 | -- | -- |
| 141.52 | 0.554 | 10.1 | -0.0898 | 0.361 | 0.669 | -- | -0.584 | -0.162 | 11.8 | 23.32 | 3504 | -- | -- |
| 141.69 | 0.554 | 10.1 | 0.0593 | 0.354 | 0.612 | -- | -- | -0.134 | 11.9 | 22.89 | 3461 | -- | -- |
| 146.86 | 0.568 | 10.1 | 0.234 | -- | 0.64 | -- | 0.551 | -0.121 | -- | 21.36 | 4642 | -- | -- |
| 151.45 | 0.577 | 10 | 0.259 | 0.296 | -- | 0.545 | -- | -0.0405 | 12.3 | -- | -- | -- | -- |
| 152.7 | 0.579 | 10 | 0.28 | 0.296 | -- | -- | -- | -0.0385 | 12 | -- | -- | -- | -- |
| 145.76 | 0.565 | 10.1 | 0.119 | -- | 0.756 | -- | -- | -0.163 | -- | 18.78 | 8783 | -- | -- |
| 141.76 | 0.555 | 10.1 | -- | 0.354 | 0.63 | -- | -- | -0.156 | 11.9 | 22.3 | 3480 | -- | -- |
| 158.19 | 0.588 | 10 | 0.27 | -- | -- | -- | -- | -0.0425 | -- | -- | -- | -- | -- |
| 154.76 | 0.582 | 10 | -- | 0.292 | -- | -- | -- | -0.0696 | 11.9 | -- | -- | -- | -- |
| 146.12 | 0.565 | 10.1 | -- | -- | 0.784 | -- | -- | -0.181 | -- | 18.78 | 8783 | -- | -- |
| 160.12 | 0.591 | 10 | -- | -- | -- | -- | -- | -0.0725 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.29 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 4 |
| 31 | 135.24 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 32 | 135.28 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 35 | 135.32 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 45 | 135.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 46 | 135.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 48 | 135.35 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 53 | 135.92 | temperature | 30.0 | 10 | > th | dose independent | sin | 12 | NA |
| 76 | 137.05 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 79 | 137.57 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 3 |
| 95 | 137.64 | temperature | 30.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 96 | 137.68 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 97 | 137.71 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 103 | 137.84 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 104 | 137.85 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 112 | 137.91 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 116 | 137.95 | wind | 5.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 118 | 137.95 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 122 | 137.98 | wind | 5.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 124 | 138.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 127 | 138.04 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 129 | 138.05 | temperature | 30.0 | 10 | > th | dose independent | sin | 17 | NA |
| 164 | 138.22 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 174 | 138.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 210 | 138.33 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 226 | 138.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 230 | 138.37 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 232 | 138.38 | temperature | 30.0 | 10 | < th | dose independent | sin | 18 | NA |
| 233 | 138.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 250 | 138.46 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 252 | 138.46 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 262 | 138.50 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 263 | 138.50 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 275 | 138.53 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 283 | 138.56 | wind | 7.0 | 90 | > th | dose independent | rect. | 16 | 13 |
| 304 | 138.62 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 320 | 138.62 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 330 | 138.63 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 333 | 138.64 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 339 | 138.66 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 344 | 138.67 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 345 | 138.67 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 15 | 20 |
| 348 | 138.69 | wind | 7.0 | 90 | > th | dose independent | rect. | 16 | 8 |
| 385 | 138.74 | wind | 5.0 | 43200 | > th | dose independent | no | NA | NA |
| 386 | 138.74 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 401 | 138.74 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 404 | 138.75 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 439 | 138.79 | radiation | 1.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 447 | 138.80 | wind | 3.0 | 10 | > th | dose dependent | rect. | 17 | 2 |
| 450 | 138.80 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 457 | 138.81 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 472 | 138.83 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 487 | 138.85 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 493 | 138.87 | wind | 7.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 497 | 138.88 | wind | 5.0 | 43200 | < th | dose independent | no | NA | NA |
| 509 | 138.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 514 | 138.90 | wind | 3.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 530 | 138.92 | wind | 7.0 | 90 | < th | dose independent | sin | 11 | NA |
| 560 | 138.96 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 574 | 138.98 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 576 | 138.98 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 577 | 138.99 | wind | 7.0 | 90 | > th | dose independent | sin | 13 | NA |
| 584 | 138.99 | wind | 5.0 | 30 | > th | dose dependent | rect. | 17 | 12 |
| 626 | 139.04 | radiation | 1.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 630 | 139.04 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 631 | 139.04 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 636 | 139.05 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 649 | 139.07 | wind | 5.0 | 90 | > th | dose dependent | rect. | 17 | 7 |
| 683 | 139.10 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 690 | 139.12 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 691 | 139.12 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 706 | 139.14 | wind | 7.0 | 90 | < th | dose independent | sin | 13 | NA |
| 714 | 139.16 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 728 | 139.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 737 | 139.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 748 | 139.19 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 23 |
| 750 | 139.20 | temperature | 30.0 | 10 | < th | dose independent | sin | 13 | NA |
| 760 | 139.21 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 791 | 139.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 824 | 139.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 831 | 139.26 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 839 | 139.27 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 871 | 139.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 901 | 139.32 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 18 |
| 904 | 139.32 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 908 | 139.33 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 924 | 139.34 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 925 | 139.34 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 928 | 139.34 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 958 | 139.37 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 989 | 139.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |