Os06g0123000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0123000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.67 | 0.229 | 2.97 | -0.0992 | 0.00118 | -0.208 | -0.135 | 1.1 | 0.0326 | 20.5 | 1.103 | 16 | -- | -- |
| 24.67 | 0.233 | 2.96 | -0.0471 | 0.0099 | -0.13 | 0.166 | -- | 0.0483 | 12.2 | 1.199 | 14 | -- | -- |
| 23.73 | 0.227 | 2.97 | -0.096 | 0.0024 | -0.209 | -- | 1.11 | 0.0331 | 19.6 | 1.1 | 16 | -- | -- |
| 24.79 | 0.233 | 2.96 | -0.0403 | 0.009 | -0.127 | -- | -- | 0.0489 | 11.3 | 1.161 | 14 | -- | -- |
| 23.73 | 0.227 | 2.97 | -0.0951 | -- | -0.208 | -- | 1.1 | 0.0325 | -- | 1.101 | 16 | -- | -- |
| 25.35 | 0.236 | 2.96 | -0.0287 | 0.0345 | -- | -0.128 | -- | 0.0431 | 2.84 | -- | -- | -- | -- |
| 25.38 | 0.236 | 2.96 | -0.0258 | 0.0429 | -- | -- | -- | 0.0436 | 4.99 | -- | -- | -- | -- |
| 24.8 | 0.233 | 2.96 | -0.0404 | -- | -0.126 | -- | -- | 0.0487 | -- | 1.161 | 14 | -- | -- |
| 24.83 | 0.233 | 2.96 | -- | 0.00908 | -0.124 | -- | -- | 0.0532 | 11.1 | 1.2 | 14 | -- | -- |
| 25.47 | 0.236 | 2.96 | -0.0242 | -- | -- | -- | -- | 0.0447 | -- | -- | -- | -- | -- |
| 25.39 | 0.236 | 2.96 | -- | 0.0424 | -- | -- | -- | 0.0465 | 5.01 | -- | -- | -- | -- |
| 24.84 | 0.233 | 2.96 | -- | -- | -0.122 | -- | -- | 0.0531 | -- | 1.161 | 14 | -- | -- |
| 25.49 | 0.236 | 2.96 | -- | -- | -- | -- | -- | 0.0474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.94 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 19.98 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 3 | 19.99 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 20.00 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 10 | 20.05 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 11 | 20.05 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 15 | 20.07 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 20.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 22 | 20.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 24 | 20.09 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 25 | 20.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 29 | 20.09 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 20.09 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 36 | 20.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 20.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 39 | 20.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 20.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 20.25 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 20.34 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 20.37 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 56 | 20.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 57 | 20.51 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 58 | 20.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 61 | 20.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 65 | 20.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 75 | 20.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 76 | 20.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 96 | 20.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 167 | 21.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 171 | 21.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 172 | 21.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 173 | 21.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 199 | 22.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 241 | 22.67 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 244 | 22.67 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 251 | 22.81 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 252 | 22.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 255 | 22.86 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 323 | 23.03 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 351 | 23.09 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 360 | 23.16 | wind | 9.0 | 90 | > th | dose independent | sin | 13 | NA |
| 362 | 23.21 | wind | 9.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 372 | 23.27 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 454 | 23.34 | wind | 9.0 | 90 | < th | dose independent | sin | 12 | NA |
| 461 | 23.36 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 5 |
| 548 | 23.46 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 561 | 23.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 562 | 23.51 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 5 |
| 577 | 23.53 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 640 | 23.66 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 677 | 23.71 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 703 | 23.74 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 725 | 23.76 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 857 | 23.96 | wind | 7.0 | 10 | < th | dose independent | rect. | 16 | 10 |
| 861 | 23.96 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 10 |
| 873 | 23.98 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 10 |
| 895 | 24.01 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 906 | 24.02 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 947 | 24.07 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 23 |
| 952 | 24.07 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 961 | 24.09 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 965 | 24.09 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 975 | 24.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 976 | 24.09 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 20 |
| 983 | 24.10 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 985 | 24.10 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 1000 | 24.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 21 |