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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0121300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.94 (0.0122) R2 : 1.06e-06
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.000568 (0.0258) R2dN8 : 1.37e-06 R2N8 : 1.06e-06
σ : 0.231
deviance : 24.42
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.68 0.219 2.97 -0.118 0.0369 5.86 0.173 -21.9 0.0075 13.6 1.5 275 -- --
24.12 0.229 2.94 0.0396 0.03 -0.147 0.278 -- 0.00316 17 1.969 56 -- --
21.77 0.217 2.97 -0.123 0.0385 5.84 -- -21.8 0.0107 12 1.49 281 -- --
24.26 0.229 2.93 0.0409 0.0406 -0.146 -- -- 0.00432 14.1 1.527 37 -- --
21.85 0.218 2.98 -0.156 -- 5.7 -- -21.3 0.00716 -- 1.363 279 -- --
24.11 0.23 2.93 0.0349 0.038 -- 0.244 -- 0.00323 15.4 -- -- -- --
24.28 0.231 2.93 0.0394 0.0405 -- -- -- 0.00456 14 -- -- -- --
24.36 0.23 2.93 0.0392 -- -0.146 -- -- 0.00341 -- 1.701 39 -- --
24.31 0.23 2.93 -- 0.0398 -0.135 -- -- -0.000197 14.1 1.746 40 -- --
24.38 0.231 2.93 0.0377 -- -- -- -- 0.00362 -- -- -- -- --
24.32 0.231 2.93 -- 0.0397 -- -- -- 0.000173 13.9 -- -- -- --
24.4 0.23 2.94 -- -- -0.135 -- -- -0.000917 -- 1.924 44 -- --
24.42 0.231 2.94 -- -- -- -- -- -0.000568 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.66 atmosphere 1000.0 270 < th dose independent rect. 16 1
2 21.66 precipitation 0.1 270 > th dose dependent rect. 16 3
3 21.67 precipitation 0.1 270 > th dose independent rect. 16 1
4 21.67 precipitation 0.1 270 > th dose dependent rect. 16 1
5 21.68 atmosphere 1000.0 270 < th dose dependent rect. 16 1
10 21.72 precipitation 0.1 270 > th dose independent rect. 16 3
22 21.81 temperature 20.0 10 < th dose independent rect. 11 9
33 21.84 temperature 20.0 10 < th dose independent rect. 19 1
39 21.84 temperature 20.0 10 < th dose independent rect. 15 5
54 21.93 precipitation 0.1 270 > th dose dependent rect. 10 8
68 22.17 temperature 30.0 30 < th dose dependent rect. 20 1
69 22.18 humidity 90.0 10 < th dose independent rect. 20 1
70 22.18 precipitation 0.1 270 > th dose dependent rect. 8 10
74 22.21 humidity 80.0 10 > th dose independent rect. 20 1
75 22.21 atmosphere 1010.0 30 < th dose dependent rect. 20 1
76 22.22 wind 3.0 30 < th dose independent rect. 20 1
87 22.29 wind 7.0 10 < th dose dependent rect. 20 1
89 22.30 atmosphere 1005.0 10 < th dose independent rect. 20 1
97 22.35 wind 7.0 10 < th dose independent rect. 20 1
99 22.37 humidity 50.0 10 > th dose dependent rect. 20 1
101 22.38 atmosphere 1000.0 10 > th dose independent rect. 20 1
107 22.40 wind 1.0 10 > th dose independent rect. 20 1
109 22.40 temperature 10.0 10 > th dose independent rect. 20 1
111 22.40 temperature 30.0 10 < th dose independent rect. 20 1
112 22.40 humidity 50.0 10 > th dose independent rect. 20 1
118 22.40 radiation 1.0 10 < th dose independent rect. 20 1
123 22.40 precipitation 0.1 10 < th dose independent rect. 20 1
124 22.40 temperature 10.0 10 > th dose independent rect. 21 23
126 22.40 radiation 1.0 10 < th dose dependent rect. 20 1
131 22.40 precipitation 0.1 10 < th dose dependent rect. 20 1
176 22.51 wind 9.0 10 < th dose independent rect. 21 23
177 22.51 precipitation 0.1 270 > th dose dependent sin 21 NA
188 22.54 temperature 10.0 30 > th dose dependent rect. 20 1
189 22.54 atmosphere 995.0 30 > th dose dependent rect. 20 1
201 22.59 wind 1.0 30 > th dose dependent rect. 20 1
204 22.60 temperature 10.0 1440 > th dose independent rect. 21 1
207 22.60 temperature 30.0 1440 < th dose independent rect. 21 1
211 22.60 humidity 50.0 1440 > th dose independent rect. 21 1
217 22.60 atmosphere 995.0 1440 > th dose independent rect. 21 1
218 22.60 radiation 1.0 1440 < th dose independent rect. 21 1
238 22.60 temperature 10.0 1440 > th dose independent rect. 22 23
244 22.61 radiation 20.0 1440 < th dose dependent rect. 21 1
248 22.62 temperature 25.0 30 > th dose independent rect. 20 1
251 22.62 precipitation 0.1 270 > th dose dependent rect. 1 17
263 22.66 temperature 25.0 30 > th dose dependent rect. 20 1
274 22.67 humidity 90.0 30 < th dose dependent rect. 20 1
286 22.71 temperature 20.0 90 < th dose dependent rect. 2 1
295 22.73 atmosphere 1000.0 720 < th dose independent rect. 11 1
311 22.78 precipitation 0.1 270 > th dose dependent rect. 17 9
320 22.79 precipitation 0.1 270 > th dose dependent rect. 10 16
325 22.81 atmosphere 995.0 4320 > th dose independent rect. 14 1
335 22.84 wind 9.0 1440 < th dose independent rect. 21 1
340 22.85 atmosphere 995.0 4320 < th dose dependent rect. 14 2
353 22.86 atmosphere 995.0 4320 < th dose independent rect. 14 1
377 22.86 temperature 30.0 30 < th dose dependent rect. 18 3
396 22.88 temperature 25.0 90 < th dose dependent rect. 18 1
408 22.88 precipitation 0.1 270 > th dose dependent rect. 8 18
424 22.90 temperature 20.0 10 > th dose independent sin 21 NA
463 22.92 atmosphere 995.0 4320 > th dose independent rect. 8 8
492 22.93 temperature 20.0 10 < th dose independent sin 21 NA
493 22.93 temperature 20.0 90 < th dose independent rect. 2 1
495 22.93 humidity 70.0 30 > th dose independent rect. 18 3
512 22.95 atmosphere 995.0 4320 > th dose independent rect. 12 8
586 22.99 atmosphere 995.0 4320 > th dose independent rect. 8 12
599 23.00 radiation 1.0 4320 < th dose dependent rect. 23 1
651 23.01 radiation 1.0 4320 < th dose dependent rect. 22 4
680 23.04 atmosphere 1005.0 720 < th dose dependent rect. 9 2
681 23.04 radiation 1.0 4320 < th dose dependent rect. 22 6
714 23.07 atmosphere 995.0 4320 > th dose independent rect. 4 9
738 23.09 atmosphere 1000.0 720 > th dose independent rect. 7 7
794 23.12 atmosphere 1000.0 720 > th dose independent rect. 11 2
797 23.12 atmosphere 1000.0 720 > th dose independent rect. 11 4
813 23.12 precipitation 0.1 270 > th dose dependent rect. 10 23
853 23.15 atmosphere 995.0 4320 > th dose independent rect. 24 13
866 23.16 atmosphere 1000.0 30 > th dose independent rect. 21 21
899 23.17 humidity 60.0 30 > th dose dependent rect. 18 3
914 23.18 precipitation 0.1 270 > th dose dependent no NA NA
931 23.19 atmosphere 1000.0 720 < th dose independent rect. 8 9
935 23.19 precipitation 0.1 4320 > th dose dependent rect. 20 1
959 23.22 temperature 20.0 10 < th dose independent rect. 2 19
961 23.22 atmosphere 995.0 10 > th dose independent rect. 21 23