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Os06g0114600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.65 (0.0144) R2 : 0.00215
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.03 (0.0303) R2dN8 : 0.00278 R2N8 : 0.00215
σ : 0.271
deviance : 33.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.13 0.2 9.67 -0.621 0.263 0.279 0.191 0.371 -0.0683 22.9 20.17 214 -- --
18.45 0.2 9.68 -0.671 0.273 0.23 0.193 -- -0.0919 22.7 20.4 165 -- --
18.28 0.199 9.67 -0.637 0.261 0.285 -- 0.349 -0.0699 22.9 20.09 214 -- --
18.52 0.2 9.68 -0.675 0.274 0.228 -- -- -0.0828 22.7 20.43 141 -- --
21.87 0.218 9.67 -0.631 -- 0.278 -- 0.321 -0.0826 -- 20.4 630 -- --
20.39 0.212 9.67 -0.601 0.243 -- 0.172 -- -0.0371 22.2 -- -- -- --
20.51 0.212 9.67 -0.608 0.242 -- -- -- -0.0376 22.2 -- -- -- --
22.21 0.22 9.68 -0.691 -- 0.245 -- -- -0.0905 -- 20.56 630 -- --
29.77 0.256 9.66 -- 0.258 0.104 -- -- 0.013 22.3 20.6 139 -- --
24.07 0.229 9.67 -0.605 -- -- -- -- -0.037 -- -- -- -- --
30.25 0.257 9.66 -- 0.239 -- -- -- 0.0302 22 -- -- -- --
33.45 0.269 9.66 -- -- 0.0715 -- -- 0.00804 -- 22.38 788 -- --
33.71 0.271 9.65 -- -- -- -- -- 0.03 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.35 atmosphere 995.0 14400 > th dose independent rect. 15 4
2 17.36 atmosphere 995.0 14400 > th dose independent rect. 12 7
8 17.38 atmosphere 995.0 14400 > th dose independent rect. 7 12
9 17.39 atmosphere 995.0 14400 > th dose independent rect. 15 2
17 17.40 atmosphere 995.0 14400 > th dose independent rect. 18 1
19 17.40 atmosphere 995.0 14400 < th dose independent rect. 15 4
56 17.41 atmosphere 995.0 14400 < th dose independent rect. 15 2
73 17.41 atmosphere 995.0 14400 < th dose dependent rect. 15 4
142 17.49 atmosphere 1005.0 14400 < th dose independent rect. 22 1
156 17.52 atmosphere 995.0 14400 < th dose independent rect. 18 1
160 17.52 atmosphere 995.0 14400 < th dose dependent rect. 18 1
175 17.54 wind 9.0 14400 > th dose independent rect. 3 11
209 17.61 radiation 20.0 1440 > th dose independent rect. 6 1
226 17.61 wind 9.0 14400 > th dose dependent rect. 3 11
239 17.65 temperature 20.0 270 > th dose independent rect. 17 10
243 17.67 atmosphere 1000.0 10 > th dose dependent rect. 14 18
247 17.69 precipitation 0.1 14400 > th dose independent rect. 17 1
260 17.71 precipitation 0.1 14400 > th dose dependent rect. 17 1
261 17.71 atmosphere 1000.0 90 > th dose dependent rect. 14 18
262 17.71 atmosphere 1000.0 270 > th dose dependent rect. 12 19
263 17.72 temperature 30.0 270 < th dose dependent rect. 12 19
264 17.73 precipitation 0.1 14400 < th dose independent rect. 17 1
266 17.73 precipitation 0.1 14400 < th dose dependent rect. 17 1
267 17.73 atmosphere 995.0 270 > th dose dependent rect. 11 21
272 17.75 temperature 20.0 10 > th dose independent rect. 18 11
282 17.76 atmosphere 1005.0 14400 > th dose independent rect. 11 1
291 17.77 temperature 30.0 90 < th dose dependent rect. 13 21
297 17.79 wind 9.0 14400 > th dose independent rect. 10 4
311 17.80 atmosphere 1010.0 10 < th dose dependent sin 9 NA
324 17.84 temperature 20.0 720 < th dose independent rect. 11 10
329 17.84 wind 9.0 14400 > th dose dependent rect. 10 4
332 17.85 wind 9.0 14400 < th dose independent rect. 3 11
337 17.85 wind 9.0 14400 > th dose dependent rect. 12 1
345 17.86 wind 9.0 14400 > th dose dependent sin 5 NA
354 17.87 temperature 20.0 270 > th dose independent rect. 15 22
367 17.88 wind 9.0 14400 > th dose independent sin 5 NA
378 17.89 atmosphere 1005.0 14400 < th dose independent rect. 12 1
383 17.89 atmosphere 1010.0 10 < th dose dependent rect. 18 20
385 17.90 wind 3.0 1440 < th dose independent rect. 8 1
398 17.90 temperature 20.0 720 < th dose dependent rect. 9 14
409 17.92 temperature 20.0 720 > th dose independent rect. 14 8
439 17.95 wind 3.0 1440 > th dose independent rect. 8 1
473 17.97 temperature 20.0 270 < th dose independent rect. 11 18
474 17.97 temperature 20.0 270 > th dose independent rect. 5 22
506 17.99 atmosphere 1005.0 14400 < th dose independent rect. 11 13
507 17.99 temperature 20.0 270 < th dose independent rect. 13 16
526 18.00 radiation 20.0 1440 < th dose independent rect. 19 12
543 18.01 atmosphere 1005.0 14400 > th dose independent rect. 22 1
554 18.01 temperature 20.0 270 > th dose independent rect. 7 20
557 18.01 wind 5.0 4320 > th dose dependent rect. 20 1
580 18.02 atmosphere 1010.0 10 < th dose dependent rect. 19 17
599 18.03 atmosphere 1005.0 270 > th dose independent rect. 13 18
604 18.03 atmosphere 1010.0 10 < th dose dependent rect. 19 13
610 18.04 atmosphere 1005.0 14400 < th dose independent sin 15 NA
622 18.04 temperature 20.0 720 > th dose independent rect. 8 15
643 18.05 temperature 20.0 270 > th dose independent sin 15 NA
656 18.05 temperature 20.0 270 > th dose independent rect. 18 18
670 18.06 temperature 20.0 720 > th dose independent sin 20 NA
672 18.06 wind 5.0 4320 > th dose independent rect. 20 1
673 18.06 temperature 25.0 4320 > th dose independent rect. 24 1
674 18.06 temperature 25.0 4320 < th dose independent rect. 1 1
755 18.08 temperature 20.0 270 < th dose independent sin 15 NA
756 18.08 temperature 20.0 720 < th dose independent rect. 19 2
780 18.08 temperature 20.0 270 < th dose dependent rect. 11 18
787 18.09 wind 5.0 4320 < th dose independent rect. 20 2
809 18.10 temperature 20.0 720 < th dose independent sin 20 NA
812 18.10 wind 7.0 4320 < th dose independent rect. 20 5
868 18.12 wind 9.0 14400 < th dose independent rect. 10 4
882 18.12 temperature 20.0 10 > th dose independent rect. 7 23
886 18.12 atmosphere 1010.0 10 < th dose dependent rect. 19 11
902 18.13 radiation 20.0 1440 < th dose independent rect. 6 1
925 18.13 temperature 20.0 270 < th dose dependent rect. 14 15
942 18.14 radiation 20.0 1440 < th dose independent rect. 23 8
951 18.14 atmosphere 1005.0 14400 < th dose independent rect. 20 18
962 18.14 wind 9.0 4320 > th dose dependent rect. 18 3
975 18.15 humidity 80.0 1440 > th dose independent rect. 6 1
982 18.15 wind 7.0 4320 > th dose independent rect. 20 5