Os06g0113900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0113900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.24 | 0.359 | 11.2 | 0.974 | 1.51 | 1.02 | 0.487 | -4.73 | 0.546 | 20.8 | 25.6 | 4699 | -- | -- |
| 61.95 | 0.367 | 11.1 | 1.47 | 1.55 | 0.933 | 0.445 | -- | 0.436 | 20.6 | 15.08 | 24201 | -- | -- |
| 58.7 | 0.357 | 11.2 | 0.894 | 1.53 | 1.09 | -- | -5.36 | 0.593 | 20.8 | 26.55 | 4691 | -- | -- |
| 62.68 | 0.369 | 11.1 | 1.52 | 1.53 | 0.874 | -- | -- | 0.463 | 20.7 | 15.22 | 24014 | -- | -- |
| 144.21 | 0.559 | 11.1 | 1.17 | -- | 1.87 | -- | -4.73 | 0.418 | -- | 24.15 | 644 | -- | -- |
| 74.63 | 0.405 | 11 | 2.32 | 1.55 | -- | 0.527 | -- | 0.804 | 20.7 | -- | -- | -- | -- |
| 75.54 | 0.407 | 11 | 2.3 | 1.55 | -- | -- | -- | 0.804 | 20.8 | -- | -- | -- | -- |
| 149.9 | 0.57 | 11.1 | 2.02 | -- | 1.4 | -- | -- | 0.589 | -- | 24 | 609 | -- | -- |
| 75.69 | 0.405 | 11.2 | -- | 1.53 | 1.9 | -- | -- | -0.0224 | 20.7 | 11.01 | 47520 | -- | -- |
| 211.83 | 0.68 | 11 | 2.3 | -- | -- | -- | -- | 0.792 | -- | -- | -- | -- | -- |
| 215.46 | 0.687 | 11.1 | -- | 1.54 | -- | -- | -- | 0.547 | 20.9 | -- | -- | -- | -- |
| 208.27 | 0.672 | 11.2 | -- | -- | 1.91 | -- | -- | -0.0426 | -- | 11.61 | 47520 | -- | -- |
| 351.65 | 0.875 | 11 | -- | -- | -- | -- | -- | 0.536 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.23 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 2 | 55.29 | wind | 1.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 5 | 55.76 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 14 | 56.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 14 |
| 15 | 56.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 16 |
| 24 | 56.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 41 | 57.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 44 | 57.35 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 46 | 57.36 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 47 | 57.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 51 | 57.45 | temperature | 25.0 | 720 | < th | dose independent | rect. | 6 | 5 |
| 53 | 57.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 55 | 57.48 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 2 | 2 |
| 56 | 57.48 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 83 | 57.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 16 |
| 91 | 57.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 92 | 57.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 93 | 57.96 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 97 | 57.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 99 | 57.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 100 | 57.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 115 | 58.13 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 168 | 58.38 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 197 | 58.46 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 240 | 58.57 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 249 | 58.59 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 277 | 58.66 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 289 | 58.69 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 291 | 58.70 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 294 | 58.70 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 321 | 58.74 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 334 | 58.77 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 408 | 58.89 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 411 | 58.90 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 428 | 58.93 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 444 | 58.95 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 459 | 58.97 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 461 | 58.97 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 528 | 59.07 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 556 | 59.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 581 | 59.11 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 607 | 59.14 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 635 | 59.17 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 649 | 59.18 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 669 | 59.19 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 678 | 59.20 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 20 |
| 680 | 59.21 | temperature | 20.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 697 | 59.23 | wind | 1.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 722 | 59.25 | temperature | 20.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 740 | 59.27 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 742 | 59.27 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 743 | 59.27 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 24 | 3 |
| 758 | 59.30 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 766 | 59.31 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 775 | 59.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 795 | 59.33 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 822 | 59.35 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 845 | 59.37 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 881 | 59.40 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 905 | 59.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 916 | 59.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 922 | 59.43 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 950 | 59.45 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |