Os06g0106000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Septum site-determining protein MinD family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0106000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Septum site-determining protein MinD family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.1 | 0.221 | 11.2 | 0.72 | 0.339 | 0.642 | 0.321 | -0.472 | 0.0342 | 15.4 | 15.2 | 27 | -- | -- |
| 22.26 | 0.22 | 11.2 | 0.785 | 0.341 | 0.65 | 0.184 | -- | 0.0511 | 15.4 | 14.7 | 26 | -- | -- |
| 22.34 | 0.22 | 11.2 | 0.762 | 0.332 | 0.66 | -- | -0.178 | 0.042 | 15.3 | 15.2 | 26 | -- | -- |
| 22.36 | 0.22 | 11.2 | 0.789 | 0.332 | 0.651 | -- | -- | 0.0526 | 15.4 | 15.2 | 26 | -- | -- |
| 26.7 | 0.241 | 11.2 | 0.697 | -- | 1.04 | -- | -0.0509 | -0.00632 | -- | 14.1 | 42 | -- | -- |
| 26.36 | 0.241 | 11.1 | 0.914 | 0.519 | -- | 0.293 | -- | 0.145 | 15.1 | -- | -- | -- | -- |
| 26.64 | 0.242 | 11.1 | 0.921 | 0.52 | -- | -- | -- | 0.147 | 15.1 | -- | -- | -- | -- |
| 26.7 | 0.241 | 11.2 | 0.704 | -- | 1.04 | -- | -- | -0.00431 | -- | 13.5 | 42 | -- | -- |
| 37.05 | 0.283 | 11.2 | -- | 0.21 | 1.05 | -- | -- | -0.0756 | 15.2 | 14.27 | 78 | -- | -- |
| 42.1 | 0.303 | 11.1 | 0.898 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 48.98 | 0.327 | 11.2 | -- | 0.502 | -- | -- | -- | 0.0444 | 15.1 | -- | -- | -- | -- |
| 38.81 | 0.29 | 11.2 | -- | -- | 1.26 | -- | -- | -0.108 | -- | 12.15 | 82 | -- | -- |
| 63.39 | 0.372 | 11.2 | -- | -- | -- | -- | -- | 0.0337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.70 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 12 | 21.03 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 15 | 21.08 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 36 | 21.29 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 43 | 21.34 | temperature | 25.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 83 | 21.59 | temperature | 15.0 | 10 | > th | dose dependent | sin | 21 | NA |
| 99 | 21.64 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 13 |
| 105 | 21.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 136 | 21.75 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 168 | 21.83 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 189 | 21.90 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 221 | 21.97 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 232 | 21.98 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 240 | 21.98 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 241 | 21.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 242 | 21.99 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 246 | 21.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 259 | 22.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 262 | 22.00 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 298 | 22.01 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 325 | 22.02 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 380 | 22.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 392 | 22.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 393 | 22.08 | wind | 9.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 414 | 22.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 438 | 22.10 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 481 | 22.12 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 498 | 22.13 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 502 | 22.13 | temperature | 15.0 | 30 | > th | dose dependent | no | NA | NA |
| 530 | 22.14 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 568 | 22.17 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 600 | 22.20 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 610 | 22.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 627 | 22.23 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 638 | 22.23 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 649 | 22.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 659 | 22.25 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 660 | 22.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 661 | 22.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 675 | 22.26 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 748 | 22.31 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 762 | 22.33 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 777 | 22.34 | humidity | 70.0 | 10 | > th | dose dependent | sin | 21 | NA |
| 794 | 22.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 799 | 22.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 855 | 22.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 861 | 22.41 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 23 |
| 887 | 22.43 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 888 | 22.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 894 | 22.43 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 925 | 22.45 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 930 | 22.45 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 932 | 22.46 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 976 | 22.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 998 | 22.50 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 999 | 22.50 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 13 |